Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04793 and RBAM_029490

See DNA alignment / Visit BSNT_04793 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:20
# Commandline: needle
#    -asequence pep-align/BSNT_04793___yunG.1.9828.seq
#    -bsequence pep-align/RBAM_029490___yunG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04793___yunG-RBAM_029490___yunG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04793___yunG-RBAM_029490___yunG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04793___yunG
# 2: RBAM_029490___yunG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 122
# Identity:      71/122 (58.2%)
# Similarity:    85/122 (69.7%)
# Gaps:          12/122 ( 9.8%)
# Score: 373.0
# 
#
#=======================================

BSNT_04793___      1 -MEHVKYILKQSWSRHSSSKWTEECPSCGQCGVTALVIQDHFGGTIFKTK     49
                      .:.:..||..||.|.:|:||||:||:.||||||||||||.:||.|.|||
RBAM_029490__      1 MYDQILNILTASWPRKTSTKWTEDCPAKGQCGVTALVIQDVYGGDILKTK     50

BSNT_04793___     50 VGESWHFYNSINGVMYDFTSEQFQAPIEYQHIPSSREEAFLDTNEEQYQH     99
                     .|.||||||.|:|.:|||||.||..||.||||.|||:|||.||||.||:.
RBAM_029490__     51 TGASWHFYNRIDGEIYDFTSGQFSEPIVYQHILSSRDEAFSDTNEHQYRF    100

BSNT_04793___    100 LRSAFSRHMNSISKET------    115
                     |:|||.::|     ||      
RBAM_029490__    101 LKSAFRKNM-----ETEREKHL    117


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