Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04793 and RBAM_029490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:20
# Commandline: needle
# -asequence dna-align/BSNT_04793___yunG.1.9828.seq
# -bsequence dna-align/RBAM_029490___yunG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04793___yunG-RBAM_029490___yunG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04793___yunG-RBAM_029490___yunG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04793___yunG
# 2: RBAM_029490___yunG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 392
# Identity: 245/392 (62.5%)
# Similarity: 245/392 (62.5%)
# Gaps: 82/392 (20.9%)
# Score: 764.5
#
#
#=======================================
BSNT_04793___ 1 ----ATGGAGCATGTCAAAT-----ACATACTTAA--GCAATCCTGGTCG 39
||| .|||||| ||||| |||| || |||||||.||
RBAM_029490__ 1 TTGTATG------ATCAAATCTTGAACATA-TTAACGGC-ATCCTGGCCG 42
BSNT_04793___ 40 CGCCATTCGAGCTCTAAATGGACGGAAGAATGCCCGTCATGC----GGCC 85
|||.|..|.||..|.||||||||||||||.|||||| || ||||
RBAM_029490__ 43 CGCAAGACTAGTACAAAATGGACGGAAGATTGCCCG----GCCAAAGGCC 88
BSNT_04793___ 86 AATGCGGCGTGACGGCATTGGTGATTCAAGACCATTTCGGCGG-CACGAT 134
|.||||||||.|||||.||.||.||.||.||...||.|||||| .|| ||
RBAM_029490__ 89 AGTGCGGCGTAACGGCTTTAGTCATCCAGGATGTTTACGGCGGTGAC-AT 137
BSNT_04793___ 135 TTTCAAAACAAAAGTCGGTGAGAGCTGGCATTTTTACAACAGCATCAATG 184
|.|||||||||||..|||.|..||||||||||||||.|||.|.||..|.|
RBAM_029490__ 138 TCTCAAAACAAAAACCGGCGCAAGCTGGCATTTTTATAACCGAATAGACG 187
BSNT_04793___ 185 GTGTGATGTACGATTTTACGAGTGAGCAG-TTTCAGGCGCCTATTGAATA 233
|.|.|||.||.|||||.|||||.|..||| ||||| |.|||.||.|..||
RBAM_029490__ 188 GGGAGATATATGATTTCACGAGCGGTCAGTTTTCA-GAGCCGATCGTCTA 236
BSNT_04793___ 234 TCAGCATATTCCTTCCTCAAGAGAAGAGGCGTTTTTAGATACGAATGAGG 283
||||||.||||.|||.||.|||||.|||||.||||..||.||.||||
RBAM_029490__ 237 TCAGCACATTCTTTCTTCCAGAGATGAGGCATTTTCGGACACCAATG--- 283
BSNT_04793___ 284 AACAATATCAGCATCTTCGTTC--------TGCATTTTCCCGCCATATGA 325
||.|||||.|.| .|||| |||||| ||.| |
RBAM_029490__ 284 ---AACATCAGTACC--GGTTCCTGAAAAGTGCATT-------CAGA--A 319
BSNT_04793___ 326 ACAGCATTTCCAAGGAAACCTGA------------------- 348
|.|.||| ||||| |.||
RBAM_029490__ 320 AAAACAT------GGAAA-CAGAAAGAGAAAAACACCTGTGA 354
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