Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04787 and RBAM_029450

See DNA alignment / Visit BSNT_04787 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:19
# Commandline: needle
#    -asequence pep-align/BSNT_04787___yunB.1.9828.seq
#    -bsequence pep-align/RBAM_029450___yunB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04787___yunB-RBAM_029450___yunB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04787___yunB-RBAM_029450___yunB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04787___yunB
# 2: RBAM_029450___yunB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     189/261 (72.4%)
# Similarity:   213/261 (81.6%)
# Gaps:          28/261 (10.7%)
# Score: 954.5
# 
#
#=======================================

BSNT_04787___      1 -------------MPFRYVMLLSVVFFILSTTVSLWMINGSIKPVLMDIG     37
                                  :|||||:|||..|||:||.:||||||.|||||||:||
RBAM_029450__      1 MPRYRSALRKRGPLPFRYVLLLSFAFFIISTVISLWMINSSIKPVLMNIG     50

BSNT_04787___     38 EMETKRIATEVIQDSIEDYMSDSENMKDMFQMNSDENGNLTTIDFNTQVV     87
                     ||||||:|||||.:|||:|||.|:|:|||..|.:||||.:||:|||||:|
RBAM_029450__     51 EMETKRVATEVITESIEEYMSHSDNVKDMVDMKTDENGKVTTMDFNTQMV    100

BSNT_04787___     88 NSVKTKVTKQLQAHLKEME----THTGHSGA--SENIMINIPLGQVTGNS    131
                     ||:|.||||||||||||.|    .|....||  ::.|||:||||||||||
RBAM_029450__    101 NSMKAKVTKQLQAHLKEAELNNKQHETEKGAKTADEIMIDIPLGQVTGNS    150

BSNT_04787___    132 LLGNLGPKIPVRFNLIGDAFTDVKTKIKPYGINNALIDISIFVEIKVKVI    181
                     :||||||||||||||||||.||||||||||||||||||||||||||||||
RBAM_029450__    151 ILGNLGPKIPVRFNLIGDALTDVKTKIKPYGINNALIDISIFVEIKVKVI    200

BSNT_04787___    182 IPFASKTAVVTNNVPVSIKAVQGEVPQFYNGSGGSGVTPSVQLPSSKEED    231
                     |||||||:|||||:||||||:||||||||||||||||||||||||.|:  
RBAM_029450__    201 IPFASKTSVVTNNIPVSIKAIQGEVPQFYNGSGGSGVTPSVQLPSEKQ--    248

BSNT_04787___    232 GADSKKEKSSK    242
                         ||:|   
RBAM_029450__    249 ----KKDK---    252


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