Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04784 and RBAM_029440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:19
# Commandline: needle
# -asequence pep-align/BSNT_04784___yunA.1.9828.seq
# -bsequence pep-align/RBAM_029440___yunA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04784___yunA-RBAM_029440___yunA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04784___yunA-RBAM_029440___yunA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04784___yunA
# 2: RBAM_029440___yunA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity: 280/326 (85.9%)
# Similarity: 303/326 (92.9%)
# Gaps: 1/326 ( 0.3%)
# Score: 1558.0
#
#
#=======================================
BSNT_04784___ 1 MKVLLSALLLLLFAFEPSVSGKKLSDPVLSKRMELYHKIEAVTQIPWYAL 50
||||||| ||||..|.|:.|||:.|.||..:||:||.|.|||||||||.|
RBAM_029440__ 1 MKVLLSA-LLLLSVFCPAASGKEQSAPVYGERMQLYRKAEAVTQIPWYVL 49
BSNT_04784___ 51 AAVDQYEENVRSNRKDLPEKAGIISIYIPDDIWSGPENPNPKDDAPLSIK 100
||||||||||||||||||||||||||||||.:||||||||||||||||||
RBAM_029440__ 50 AAVDQYEENVRSNRKDLPEKAGIISIYIPDHLWSGPENPNPKDDAPLSIK 99
BSNT_04784___ 101 VFDGIGMDGDGDGKAEVSNDEDILYTFSQYLLSYGTDEDNIRIGLWNYYR 150
||||||:||||||||||||||||||||:|||..:|||.|:||||||||||
RBAM_029440__ 100 VFDGIGLDGDGDGKAEVSNDEDILYTFAQYLAGFGTDLDHIRIGLWNYYR 149
BSNT_04784___ 151 RDQTVGIISEFMKLFKAYGHIDLGEHAFPLPIRTDYSYRSTWGDARGFGG 200
||||||||:|||||||.:|.:||||||||||::||||||||||.||||||
RBAM_029440__ 150 RDQTVGIITEFMKLFKTFGRLDLGEHAFPLPVKTDYSYRSTWGAARGFGG 199
BSNT_04784___ 201 RRIHEGTDIFAHYGLPVKSTCYGVVEMKGWNRFGGWRIGIRDINNTYHYF 250
||||||||:||||||||:|||||:||||||||||||||||||||||||||
RBAM_029440__ 200 RRIHEGTDLFAHYGLPVRSTCYGIVEMKGWNRFGGWRIGIRDINNTYHYF 249
BSNT_04784___ 251 AHLNGFAKGIKTGQIVEPGQVIGSVGSSGYGPPGTAGKFPPHLHYGMYKD 300
|||||||||:..||||:||:||||||||||||||||||||||||||||||
RBAM_029440__ 250 AHLNGFAKGVHKGQIVKPGEVIGSVGSSGYGPPGTAGKFPPHLHYGMYKD 299
BSNT_04784___ 301 NGRTEWSFDPYPHLRAWERYEYQKKK 326
|||:|||||||||||||||.|.::||
RBAM_029440__ 300 NGRSEWSFDPYPHLRAWERKEIRRKK 325
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