Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04781 and RBAM_029420

See DNA alignment / Visit BSNT_04781 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:19
# Commandline: needle
#    -asequence pep-align/BSNT_04781.1.9828.seq
#    -bsequence pep-align/RBAM_029420___yutD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04781-RBAM_029420___yutD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04781-RBAM_029420___yutD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04781
# 2: RBAM_029420___yutD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:      88/102 (86.3%)
# Similarity:    90/102 (88.2%)
# Gaps:          11/102 (10.8%)
# Score: 476.0
# 
#
#=======================================

BSNT_04781         1 -----------MILIQNAEFELVHNFKDGFNEEAFKARYSDILNKYDYIV     39
                                |||||||||||||:||:||||||||||||||||||||||
RBAM_029420__      1 MIVKSDKRGEDMILIQNAEFELVHDFKNGFNEEAFKARYSDILNKYDYIV     50

BSNT_04781        40 GDWGYGQLRLKGFFDDQNQKATFETKISTLDEYIYEYCNFGCAYFVLKRI     89
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
RBAM_029420__     51 GDWGYSQLRLKGFFDDQNQKATFETKISTLDEYIYEYCNFGCAYFVLKRI    100

BSNT_04781        90 RK     91
                     ||
RBAM_029420__    101 RK    102


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