Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04779 and RBAM_029400

See DNA alignment / Visit BSNT_04779 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:19
# Commandline: needle
#    -asequence pep-align/BSNT_04779___yutF.1.9828.seq
#    -bsequence pep-align/RBAM_029400___yutF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04779___yutF-RBAM_029400___yutF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04779___yutF-RBAM_029400___yutF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04779___yutF
# 2: RBAM_029400___yutF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     234/256 (91.4%)
# Similarity:   246/256 (96.1%)
# Gaps:           0/256 ( 0.0%)
# Score: 1207.0
# 
#
#=======================================

BSNT_04779___      1 MKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTP     50
                     ||.||||||||||||||||||||||||||||||.||:|||||||||||||
RBAM_029400__      1 MKDYKGYLIDLDGTMYNGTEKIEEACEFVRTLKARGIPYLFVTNNSSRTP     50

BSNT_04779___     51 KQVADKLVSFDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGIRQA    100
                     |||||||:||||||:|||||||||||||||||:|||||||||||||||||
RBAM_029400__     51 KQVADKLMSFDIPASEEQVFTTSMATAQHIAQEKKDASVYVIGEEGIRQA    100

BSNT_04779___    101 IEENGLTFGGENADFVVVGIDRSITYEKFAVGCLAIRNGARFISTNGDIA    150
                     ||||||:||.||||||||||||.|||||.|.|||||||||||||||||:|
RBAM_029400__    101 IEENGLSFGEENADFVVVGIDRGITYEKLATGCLAIRNGARFISTNGDVA    150

BSNT_04779___    151 IPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSE    200
                     ||||||||||||||||||||||||:||||||||||||||||||||||:||
RBAM_029400__    151 IPTERGLLPGNGSLTSVLTVSTGVEPVFIGKPESIIMEQAMRVLGTDISE    200

BSNT_04779___    201 TLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLT    250
                     |||||||||||||||||||||||||||||||||||.|..:|||:||||||
RBAM_029400__    201 TLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMADYGQKPTYAIDSLT    250

BSNT_04779___    251 EWIPYI    256
                     |||.::
RBAM_029400__    251 EWIEHL    256


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