Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04775 and RBAM_029380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:18
# Commandline: needle
# -asequence pep-align/BSNT_04775___yutH.1.9828.seq
# -bsequence pep-align/RBAM_029380___yutH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04775___yutH-RBAM_029380___yutH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04775___yutH-RBAM_029380___yutH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04775___yutH
# 2: RBAM_029380___yutH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity: 260/339 (76.7%)
# Similarity: 294/339 (86.7%)
# Gaps: 2/339 ( 0.6%)
# Score: 1419.0
#
#
#=======================================
BSNT_04775___ 1 MVKGTIKEKYGIHIRQLSMYQHTYQCFQTPNSYFLIVPVSQFSETELAEL 50
:|..||||||||:||||:|| .|||||||||:|||:|||.||::||.||
RBAM_029380__ 1 -MKSIIKEKYGIHVRQLSVYQ-KYQCFQTPNSFFLIIPVSGFSQSELTEL 48
BSNT_04775___ 51 YYMSQYLQEQSDPYVSVFIFTKEGELTFEHEGKTYALLKAAPPYSNRAFS 100
|||||||||||||||||||||||||||||.||||||||||..|.|||:||
RBAM_029380__ 49 YYMSQYLQEQSDPYVSVFIFTKEGELTFEDEGKTYALLKAPIPVSNRSFS 98
BSNT_04775___ 101 IGAELAEFHRKGRGYPYEVKAAGRIGQWKDLWGKRIDQLEAFWQRKVQTP 150
:|.|||||||||||:|||||.||||||||||||||:||||:||.:|:...
RBAM_029380__ 99 VGGELAEFHRKGRGFPYEVKEAGRIGQWKDLWGKRVDQLESFWMQKIHMS 148
BSNT_04775___ 151 PHEPFDKKMIESFPYYLGLSENAIQYLVDTELDDKPQAADSGTICHQRME 200
|.|||:|||||:||||.||:||||||||||||||.|.|.|||||||||||
RBAM_029380__ 149 PLEPFEKKMIEAFPYYSGLAENAIQYLVDTELDDNPGAEDSGTICHQRME 198
BSNT_04775___ 201 RHTWSPESLIRIPADWVFDHASRDLAEYMRHTFLHHRQDFNQQGFLFLQE 250
|.|||.|||||||.|||||||:||:|||||.|:|:||.|..:.|||||||
RBAM_029380__ 199 RDTWSEESLIRIPGDWVFDHAARDIAEYMRSTYLYHRDDLLKDGFLFLQE 248
BSNT_04775___ 251 YEQVTPLSSFSKRLLYSRLLFPLHYFEIVESYYMSSESEKHYFEEQLNFI 300
|||:||||||||||.|||||||||:||.|||||:|.:|||.|:||||::|
RBAM_029380__ 249 YEQITPLSSFSKRLFYSRLLFPLHFFETVESYYISHDSEKQYYEEQLDYI 298
BSNT_04775___ 301 LNDCGRYEQFLNTAQEFMNMRAQKLFVPRVSWLGKGSSG 339
|.||.||||||.|....||:|:.::|||.|:|||||.|.
RBAM_029380__ 299 LADCTRYEQFLQTCHNMMNVRSAQVFVPPVAWLGKGISS 337
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