Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04771 and RBAM_029350

See DNA alignment / Visit BSNT_04771 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:18
# Commandline: needle
#    -asequence pep-align/BSNT_04771___thrB.1.9828.seq
#    -bsequence pep-align/RBAM_029350___thrB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04771___thrB-RBAM_029350___thrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04771___thrB-RBAM_029350___thrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04771___thrB
# 2: RBAM_029350___thrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     260/309 (84.1%)
# Similarity:   282/309 (91.3%)
# Gaps:           0/309 ( 0.0%)
# Score: 1353.0
# 
#
#=======================================

BSNT_04771___      1 MNEADMLFSVTVPGSTANLGPGFDSVGMALSRYLKLTVFESDKWSFEAET     50
                     ||||:||||:||||||||||||||||||||||||||:||.:|:|.|.|||
RBAM_029350__      1 MNEAEMLFSITVPGSTANLGPGFDSVGMALSRYLKLSVFRNDEWQFSAET     50

BSNT_04771___     51 ETVAGIPAGTDNLIYQVAKRTADLYGKEMPPVHVKVWSDIPLARGLGSSA    100
                     |||||||.|||||||||||||||.|.||:||.||||||||||||||||||
RBAM_029350__     51 ETVAGIPQGTDNLIYQVAKRTADRYQKELPPAHVKVWSDIPLARGLGSSA    100

BSNT_04771___    101 AAIVAAIELADELCGLKLSEADKLHLASLEEGHPDNAGASLVGGLVIGLH    150
                     ||||||||||||||||:|||:||||||||||||||||.|||.||||||||
RBAM_029350__    101 AAIVAAIELADELCGLQLSESDKLHLASLEEGHPDNAAASLAGGLVIGLH    150

BSNT_04771___    151 EDDETQMIRVPNADIDVVVVIPFYEVLTRDARDVLPKEFPYADAVKASAV    200
                     |:.||.::||..||||||.|||||||||||||||||||.||..|||||||
RBAM_029350__    151 EEGETHIVRVAEADIDVVAVIPFYEVLTRDARDVLPKELPYRHAVKASAV    200

BSNT_04771___    201 SNILIAAIMSKDWPLVGKIMKKDMFHQPYRAMLVPELSKVEHVAEMKGAY    250
                     ||:|:|||||.||.|.||:|:||:.|||||||||||||||||.|||||||
RBAM_029350__    201 SNLLVAAIMSNDWALAGKMMRKDILHQPYRAMLVPELSKVEHAAEMKGAY    250

BSNT_04771___    251 GTALSGAGPTILVMTEKGKGEELKEQLALHFPHCEVDALTVPKEGSIIER    300
                     |||||||||||||:.||||||||::||:.||||||:.|||||.|||:|||
RBAM_029350__    251 GTALSGAGPTILVLIEKGKGEELRKQLSEHFPHCEIAALTVPSEGSVIER    300

BSNT_04771___    301 NPLYQVKSV    309
                     |||.|||||
RBAM_029350__    301 NPLEQVKSV    309


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