Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04771 and RBAM_029350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:18
# Commandline: needle
# -asequence dna-align/BSNT_04771___thrB.1.9828.seq
# -bsequence dna-align/RBAM_029350___thrB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04771___thrB-RBAM_029350___thrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04771___thrB-RBAM_029350___thrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04771___thrB
# 2: RBAM_029350___thrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 952
# Identity: 724/952 (76.1%)
# Similarity: 724/952 (76.1%)
# Gaps: 44/952 ( 4.6%)
# Score: 2691.0
#
#
#=======================================
BSNT_04771___ 1 ATGAACGAAGCCGACATGCTGTTCTCTGTCACTGTTCCCGGAAGCACAGC 50
|||||.||.||.||.||||||||.||..|.||.|||||.||||||||.||
RBAM_029350__ 1 ATGAATGAGGCGGAGATGCTGTTTTCCATTACGGTTCCGGGAAGCACCGC 50
BSNT_04771___ 51 TAACCTAGGCCCCGGCTTTGATTCAGTCGGAATGGCGCTCAGCAGATATT 100
.|||.||||.||.||.||||||||.|||||.|||||||||||||||||||
RBAM_029350__ 51 CAACTTAGGGCCTGGGTTTGATTCCGTCGGGATGGCGCTCAGCAGATATT 100
BSNT_04771___ 101 TGAAGCTGACCGTCTTT--GAAAGCGACAAATGG----TCTTTTGAGGCT 144
|||||||..|.|| ||| |||| |||..||||| ||| .|||.
RBAM_029350__ 101 TGAAGCTTTCGGT-TTTCCGAAA-CGATGAATGGCAGTTCT----CGGCG 144
BSNT_04771___ 145 GAAACAGAAACAGTCGCCGGAATTCCGGCGGGTACAGATAACCTGATCTA 194
|||||.|||||.|||||.||.||.||....||.||.||.|||||.|||||
RBAM_029350__ 145 GAAACCGAAACTGTCGCGGGCATCCCTCAAGGAACGGACAACCTCATCTA 194
BSNT_04771___ 195 TCAAGTGGCTAAACGGACCGCAGATTTGTA-CGGAAAAGAAATGCCTCCT 243
||||||.||.||||||||.||.||....|| |.| |||||..||||.||.
RBAM_029350__ 195 TCAAGTCGCCAAACGGACGGCTGACCGCTATCAG-AAAGAGCTGCCGCCC 243
BSNT_04771___ 244 GTCCATGTGAAGGTGTGGAGCGACATCCCGCTTGCACGCGGCCTTGGCAG 293
|.||||||.||.||.|||||.||||||||.|||||.||.||.||.||.||
RBAM_029350__ 244 GCCCATGTCAAAGTATGGAGTGACATCCCCCTTGCGCGGGGTCTCGGAAG 293
BSNT_04771___ 294 CAGCGCCGCGGCGATTGTAGCGGCCATTGAACTGGCTGATGAATTATGCG 343
||||||.||.||.||.||.||.||||||||.||.||.|||||.|||||||
RBAM_029350__ 294 CAGCGCGGCCGCTATCGTCGCCGCCATTGAGCTTGCGGATGAGTTATGCG 343
BSNT_04771___ 344 GCTTAAAGCTGTCTG-AAGCGGACAAGCTGCATTTAGCCAGTCTAGAAGA 392
||.|..|||||||.| |||| |||||||||||.|||||||||||.|||||
RBAM_029350__ 344 GCCTGCAGCTGTCGGAAAGC-GACAAGCTGCACTTAGCCAGTCTTGAAGA 392
BSNT_04771___ 393 AGGACACCCGGACAATGCTGGCGCTTCTCTCGTCGGCGGACTTGTGATCG 442
.||.||.||.||.|||||.|..||||||||.|..||.||.||||||||||
RBAM_029350__ 393 GGGGCATCCTGATAATGCCGCTGCTTCTCTTGCAGGAGGGCTTGTGATCG 442
BSNT_04771___ 443 GCCTGCATGAGGATGACGAGACCCAAATGATCCGCGT-CCCGAATGCTGA 491
||||.||.||.||.|..||.||.||.||..|.||.|| .||||| ||.||
RBAM_029350__ 443 GCCTTCACGAAGAAGGTGAAACACATATCGTGCGTGTGGCCGAA-GCGGA 491
BSNT_04771___ 492 CATTGACGTAGTCGTTGTCATTCCTTTTTACGAAGTGCTGACAAGAGACG 541
.||.|||||.||.|..||.|||||.|||||||||||.|||||.||.||||
RBAM_029350__ 492 TATCGACGTTGTGGCAGTGATTCCGTTTTACGAAGTTCTGACCAGGGACG 541
BSNT_04771___ 542 CGAGAGACGTGCTTCCGAAGGAGTTTCCATATGCCG--ATGCCGTAAAAG 589
|.|||||||||||.|||||.|||.|.||.|| ||| |.|||||.||||
RBAM_029350__ 542 CAAGAGACGTGCTCCCGAAAGAGCTGCCGTA--CCGGCACGCCGTTAAAG 589
BSNT_04771___ 590 CAAGTGCTGTCAGCAATATTCTCATTGCTGCGATCATGTCCAAGGATTGG 639
||||.||.||||||||..|||||.||||||||||||||||.||.||.|||
RBAM_029350__ 590 CAAGCGCCGTCAGCAACCTTCTCGTTGCTGCGATCATGTCAAATGACTGG 639
BSNT_04771___ 640 CCGCTCGTCGGGAAAATCATGAAGAAGGATATGTTCCATCAGCCGTACCG 689
.||||||.|||||||||.||||..||.||.||..||||||||||||||||
RBAM_029350__ 640 GCGCTCGCCGGGAAAATGATGAGAAAAGACATCCTCCATCAGCCGTACCG 689
BSNT_04771___ 690 GGCGATGCTTGTGCCTGAGCTGTCAAAAGTAGAGCACGTCGCCGAGATGA 739
.||.||||||||.||||||||.|||||.||.||.||.|..|||||.||||
RBAM_029350__ 690 CGCCATGCTTGTTCCTGAGCTTTCAAAGGTGGAACATGCGGCCGAAATGA 739
BSNT_04771___ 740 AGGGCGCATATGGAACGGCTCTCAGCGGAGCAGGCCCGACGATTCTCGTC 789
|.|||||.||.||||||||.||.||||||||.||.|||||||||||.|||
RBAM_029350__ 740 AAGGCGCTTACGGAACGGCGCTGAGCGGAGCGGGACCGACGATTCTTGTC 789
BSNT_04771___ 790 ATGACCGAAAAAGGAAAGGGAGAAGAGCTAAAAGAACAGCTCGCGCTT-- 837
.|.|..|||||||||||||||||||||||.|.|.||||||| ||
RBAM_029350__ 790 CTAATTGAAAAAGGAAAGGGAGAAGAGCTGAGAAAACAGCT-----TTCT 834
BSNT_04771___ 838 ---CATTTCCCTCATTGTGAAGTAGA------CGCTTTGACCGTTCCGAA 878
||||||||.||.|||| ||| ||||| |||||.|||..
RBAM_029350__ 835 GAGCATTTCCCCCACTGTG----AGATTGCGGCGCTT--ACCGTCCCGTC 878
BSNT_04771___ 879 AGAGGGAAGTATAATAGAGCGAAATCCTTTATATCAAGTAAAAAGTGTAT 928
|||.|||||..||||.||.||.|||||||||.|.||.||.||||||||||
RBAM_029350__ 879 AGAAGGAAGCGTAATTGAACGGAATCCTTTAGAACAGGTGAAAAGTGTAT 928
BSNT_04771___ 929 AG 930
|.
RBAM_029350__ 929 AA 930
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