Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04767 and RBAM_029320

See DNA alignment / Visit BSNT_04767 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:18
# Commandline: needle
#    -asequence pep-align/BSNT_04767___yuzD.1.9828.seq
#    -bsequence pep-align/RBAM_029320___yuzD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04767___yuzD-RBAM_029320___yuzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04767___yuzD-RBAM_029320___yuzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04767___yuzD
# 2: RBAM_029320___yuzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      79/108 (73.1%)
# Similarity:    89/108 (82.4%)
# Gaps:           1/108 ( 0.9%)
# Score: 430.0
# 
#
#=======================================

BSNT_04767___      1 -MKPVMLSVYGAETVCASCVNMPTAKDTYEWLEAALKRKYPNQPFEMQYI     49
                      .|||.||||||||:||||||||:||||:|||.|||:||||.|||.|:||
RBAM_029320__      1 MTKPVTLSVYGAETLCASCVNMPSAKDTFEWLGAALQRKYPEQPFHMRYI     50

BSNT_04767___     50 DIYEPPDNEHAKELAEKIRNDEYFYPLVLVEDKIVGEGNPKLKDVYEEME     99
                     ||..||..:..:||||:|||||:|||||||||.|||||||.|||:|||||
RBAM_029320__     51 DIDAPPQQKETEELAERIRNDEFFYPLVLVEDVIVGEGNPHLKDIYEEME    100

BSNT_04767___    100 KHGYTENR    107
                     |.||....
RBAM_029320__    101 KRGYVAGS    108


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