Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04759 and RBAM_029280

See DNA alignment / Visit BSNT_04759 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:17
# Commandline: needle
#    -asequence pep-align/BSNT_04759___dapF.1.9828.seq
#    -bsequence pep-align/RBAM_029280___dapF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04759___dapF-RBAM_029280___dapF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04759___dapF-RBAM_029280___dapF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04759___dapF
# 2: RBAM_029280___dapF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     242/284 (85.2%)
# Similarity:   264/284 (93.0%)
# Gaps:           0/284 ( 0.0%)
# Score: 1301.0
# 
#
#=======================================

BSNT_04759___      1 MNSFRFTKMHGLGNSYIYVNQFEEQLPEEKLSEIAIQVSSVYTGIGSDGM     50
                     |||||||||||||||||||||||||||||:|:|||::|||::||||||||
RBAM_029280__      1 MNSFRFTKMHGLGNSYIYVNQFEEQLPEERLAEIAVKVSSIHTGIGSDGM     50

BSNT_04759___     51 ILICPSDQAPVKMRIFNNDGSEGKNCGNGLRCVAKYAYEHKLVEETSFLI    100
                     ||||||::||||||||||||||||||||||||||||||||||.|||||.|
RBAM_029280__     51 ILICPSEKAPVKMRIFNNDGSEGKNCGNGLRCVAKYAYEHKLTEETSFFI    100

BSNT_04759___    101 ETLSGLVKAEVQVENGKVNVVTVDMGEPRLTKSELPMLDGGEEHTINETM    150
                     |||||||||::..:||.|..|.||||||||||.|||||...:|.||:||.
RBAM_029280__    101 ETLSGLVKADITEDNGIVREVAVDMGEPRLTKKELPMLGNEDERTIDETF    150

BSNT_04759___    151 AFGEVELTGTAVSMGNPHIVFPIADIEQAPLTTLGPVIEKDPRFPEGINV    200
                     .|||.||:||||||||||||||:|||.||||||||||||||||||||:||
RBAM_029280__    151 VFGETELSGTAVSMGNPHIVFPVADINQAPLTTLGPVIEKDPRFPEGVNV    200

BSNT_04759___    201 EFVETVNEQELHFRVWERGSGITQACGTGACAAAVASVLNGVSKRNQDIT    250
                     ||||||:..||||||||||||||||||||||||||||||||||:||:|||
RBAM_029280__    201 EFVETVSADELHFRVWERGSGITQACGTGACAAAVASVLNGVSERNRDIT    250

BSNT_04759___    251 VHLAGGDLVINWKDNGHVMMTGPAETVCEGVYFL    284
                     ||||||||||||:|||||:|||||||||.|||:|
RBAM_029280__    251 VHLAGGDLVINWQDNGHVLMTGPAETVCSGVYYL    284


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