Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04759 and RBAM_029280

See Amino acid alignment / Visit BSNT_04759 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:17
# Commandline: needle
#    -asequence dna-align/BSNT_04759___dapF.1.9828.seq
#    -bsequence dna-align/RBAM_029280___dapF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04759___dapF-RBAM_029280___dapF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04759___dapF-RBAM_029280___dapF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04759___dapF
# 2: RBAM_029280___dapF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 868
# Identity:     662/868 (76.3%)
# Similarity:   662/868 (76.3%)
# Gaps:          26/868 ( 3.0%)
# Score: 2472.5
# 
#
#=======================================

BSNT_04759___      1 ATGAACTCATTTCGATTTACCAAAATGCACGGCCTGGGAAACAGTTATAT     50
                     |||||.|||||.||.||||||||.||||||||.||.||||||||||||||
RBAM_029280__      1 ATGAATTCATTCCGTTTTACCAAGATGCACGGTCTTGGAAACAGTTATAT     50

BSNT_04759___     51 TTATGTGAATCAATTTGAAGAACAGCTTCCAGAAGAAAAACTGTCAGAGA    100
                     .|||||.||||||||||||||||||||.||.||||||...|||.|.||||
RBAM_029280__     51 ATATGTAAATCAATTTGAAGAACAGCTGCCGGAAGAACGGCTGGCTGAGA    100

BSNT_04759___    101 TTGCAATTCAGGTTTCTTCTG--TTTATACAGGGATCGGATCCGACGGAA    148
                     ||||..||.|.||.||  |.|  ||.|.||.||.|||||.||.|||||||
RBAM_029280__    101 TTGCCGTTAAAGTGTC--CAGCATTCACACGGGCATCGGCTCTGACGGAA    148

BSNT_04759___    149 TGATCCTGATATGCCCATCAGACCAAGCGCCTGTTAAAATGCGGATTTTT    198
                     |||||||.||.||.||.|||||..|||||||.||.|||||||||||||||
RBAM_029280__    149 TGATCCTCATCTGTCCGTCAGAAAAAGCGCCCGTCAAAATGCGGATTTTT    198

BSNT_04759___    199 AATAATGACGGATCTGAAGGGAAAAACTGCGGCAACGGCCTGCGCTGCGT    248
                     |||||||||||.||.|||||||||||.||||||||||||||.|||||.||
RBAM_029280__    199 AATAATGACGGCTCAGAAGGGAAAAATTGCGGCAACGGCCTTCGCTGTGT    248

BSNT_04759___    249 CGCAAAATACGCATATGAGCATAAGCTGGTTGAGGAAACATCTTTTCTGA    298
                     .|||||.||||||||.||.|||||||||...||.|||||.||.|||.|.|
RBAM_029280__    249 GGCAAAGTACGCATACGAACATAAGCTGACAGAAGAAACGTCCTTTTTCA    298

BSNT_04759___    299 TTGAAACTCTCTCCGGGCTTGTGAAAGCGGAGGTTCAAGTCGAAAACGGA    348
                     ||||.||.||.||.||.|||||||||||.||..||..||..||.|||||.
RBAM_029280__    299 TTGAGACGCTTTCAGGTCTTGTGAAAGCAGACATTACAGAGGACAACGGG    348

BSNT_04759___    349 AAAGTGAATGTGGTCACTGTCGATATGGGCGAACCGCGCTTGACAAAATC    398
                     |..|||..||..|||.|.||.||||||||||||||||||.|.||.|||..
RBAM_029280__    349 ATTGTGCGTGAAGTCGCCGTTGATATGGGCGAACCGCGCCTCACCAAAAA    398

BSNT_04759___    399 CGAGCTCCCGATGCTTGACGGCGGGGAAGA-GCAC--ACAATCAATGAAA    445
                     .|||||.||||||||   ||||...||||| |.||  ||.|||.||||||
RBAM_029280__    399 AGAGCTGCCGATGCT---CGGCAATGAAGATGAACGGACGATCGATGAAA    445

BSNT_04759___    446 CGATGGCATTTGGTGAAGTAGAACTAACAGGCACTGCCGTTTCAATGGGA    495
                     |..|.|..|||||.|||...||.||..|.||.||.|||||.|||||||||
RBAM_029280__    446 CCTTTGTTTTTGGAGAAACGGAGCTTTCCGGAACAGCCGTATCAATGGGA    495

BSNT_04759___    496 AATCCGCATATCGTTTTTCCGATCGCAGACATTGAACAGGCACC-CTTAA    544
                     ||.||.|||||.|||||||||.|.||.||.||..|.||.||.|| ||| |
RBAM_029280__    496 AACCCCCATATTGTTTTTCCGGTTGCGGATATCAATCAAGCGCCTCTT-A    544

BSNT_04759___    545 CGACACTGGGGCCGGTGATTGAGAAAGATCCGAGATTTCCGGAAGGCATC    594
                     |.||.||.||.||.||.|||||.|||||.||||||||.|||||||||.||
RBAM_029280__    545 CAACGCTCGGTCCCGTCATTGAAAAAGACCCGAGATTCCCGGAAGGCGTC    594

BSNT_04759___    595 AATGTGGAATTCGTTGAAACCGTGA------ATGAACAAGAATTGCATTT    638
                     |||||.|||||.||.||||||||.|      ||||||      |.|||||
RBAM_029280__    595 AATGTCGAATTTGTGGAAACCGTCAGCGCCGATGAAC------TTCATTT    638

BSNT_04759___    639 CCGCGTCTGGGAACGGGGATCAGGGATTACTCAGGCATGCGGGACAGGAG    688
                     ||||||.||||||||.||.||.||.|||||.|||||.|||||.|||||.|
RBAM_029280__    639 CCGCGTATGGGAACGCGGCTCCGGCATTACACAGGCTTGCGGAACAGGCG    688

BSNT_04759___    689 CATGTGCAGCGGCAGTCGCATCTGTATTAAACGGCGTATCAAAGCGAAAT    738
                     |.|||||.|||||.||||||||.|||||.|||||.||.||..|.|||||.
RBAM_029280__    689 CCTGTGCGGCGGCTGTCGCATCCGTATTGAACGGTGTTTCCGAACGAAAC    738

BSNT_04759___    739 CAAGACATCACGGTGCATTTAGCAGGCGGGGATTTGGTGATAAACTGGAA    788
                     |..||.|||||.||.||||||||.||.||.||..|.|||||.||.|||.|
RBAM_029280__    739 CGGGATATCACCGTTCATTTAGCGGGAGGCGACCTTGTGATTAATTGGCA    788

BSNT_04759___    789 AGATAACGGCCATGTAATGATGACAGGGCCGGCTGAAACCGTTTGTGAG-    837
                     .||.|||||.||.||..|||||||.||.||.||.||||||||.|| .|| 
RBAM_029280__    789 GGACAACGGGCACGTGCTGATGACGGGCCCCGCCGAAACCGTATG-CAGC    837

BSNT_04759___    838 GGTGTCTATTTCTTGTAA    855
                     ||.|||||||..||||||
RBAM_029280__    838 GGCGTCTATTATTTGTAA    855


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04759 and RBAM_029280

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
