Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05897 and RBAM_029260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:24
# Commandline: needle
# -asequence pep-align/BSNT_05897.1.9828.seq
# -bsequence pep-align/RBAM_029260___dltE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05897-RBAM_029260___dltE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05897-RBAM_029260___dltE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05897
# 2: RBAM_029260___dltE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity: 59/259 (22.8%)
# Similarity: 79/259 (30.5%)
# Gaps: 139/259 (53.7%)
# Score: 251.5
#
#
#=======================================
BSNT_05897 0 -------------------------------------------------- 0
RBAM_029260__ 1 MKLTGNTILITGGNAGIGLAFAERFLKAGNKVIVTGRREHALQKAKETFP 50
BSNT_05897 0 -------------------------------------------------- 0
RBAM_029260__ 51 DLITYVSDLSIPSERISLFEWVKENYPEVNVLVNNAGIQQRFHVLKADAK 100
BSNT_05897 1 ----------------------------MKQPEAAIVQVTSGLAFNPLAV 22
..:.:||.:.|:|||||.|||:
RBAM_029260__ 101 DNWDYFNKEITTNIEAPFHLSMLFAPFFAGKEDAAFINVSSGLAFTPLAI 150
BSNT_05897 23 YPVYCATKAALHSFSLTLRHQLRDTSVEVIEMVPPMVDTGLNQKSRDKQG 72
.|:|.|||||||||:::|||||.|:||||||:.||.|:|.|. ..|
RBAM_029260__ 151 APIYSATKAALHSFTMSLRHQLSDSSVEVIEVAPPAVNTDLG-----GAG 195
BSNT_05897 73 LTYRGISSEEYVQYFLDGLKEGKQEI----TNERVEGLRDATRADYDRLF 118
|..:|...:|:......||||||||| :.||:...||........::
RBAM_029260__ 196 LHTQGEPLDEFADGIFKGLKEGKQEIGYGSSEERLRMSRDKADEHTANMY 245
BSNT_05897 119 EQM-NTQEN 126
..| :|.|
RBAM_029260__ 246 NAMKHTIE- 253
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