Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01985 and RBAM_029250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence pep-align/BSNT_01985___yjcK.1.9828.seq
# -bsequence pep-align/RBAM_029250___yjcK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01985___yjcK-RBAM_029250___yjcK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01985___yjcK-RBAM_029250___yjcK.aln
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#
# Aligned_sequences: 2
# 1: BSNT_01985___yjcK
# 2: RBAM_029250___yjcK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 117/181 (64.6%)
# Similarity: 146/181 (80.7%)
# Gaps: 2/181 ( 1.1%)
# Score: 618.0
#
#
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BSNT_01985___ 1 MLKGKTIYVRPLEVTDAEENLRLQSENRDFFEQFSMIRTDDYYTVEGQRK 50
|.:|.::.:|||.:.|||:.|.||:|||.|||:|:|.|.:|:||:||::|
RBAM_029250__ 1 MQEGNSVDIRPLSLNDAEQELVLQTENRMFFERFAMSRQEDFYTLEGRKK 50
BSNT_01985___ 51 RITEYQERLEKDEEYHFGIFTASDDRLIGTVSLFQIIRGALQTAFIGYFL 100
||.:..:..|.|.||.|||| ..|..||||:||||::||:||:|||||||
RBAM_029250__ 51 RIEQSLKNAENDTEYSFGIF-LQDQALIGTISLFQVVRGSLQSAFIGYFL 99
BSNT_01985___ 101 DKAHNGKDIMTEAVRLVVDYAFHELKLHRIEAGVMPRNLGSMRVLEKAGF 150
|..||||...|:||:|.|||||:||:||||||||||.|..|:||||||||
RBAM_029250__ 100 DGEHNGKGYATKAVKLAVDYAFNELELHRIEAGVMPHNKASIRVLEKAGF 149
BSNT_01985___ 151 HKEGIARKNVKINGVWEDHQVLAILNPDDEQ 181
||||||||||||||.|||||||||::|:|.
RBAM_029250__ 150 HKEGIARKNVKINGKWEDHQVLAIIHPEDT- 179
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