Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04725 and RBAM_029160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence pep-align/BSNT_04725___yumC.1.9828.seq
# -bsequence pep-align/RBAM_029160___yumC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04725___yumC-RBAM_029160___yumC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04725___yumC-RBAM_029160___yumC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04725___yumC
# 2: RBAM_029160___yumC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity: 313/332 (94.3%)
# Similarity: 325/332 (97.9%)
# Gaps: 1/332 ( 0.3%)
# Score: 1632.0
#
#
#=======================================
BSNT_04725___ 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQARVKIIESLPQLGGQLSALY 50
|:||:||||||:|||||||||||||||||||.||||||||||||||||||
RBAM_029160__ 1 MQEDSKVYDITVIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALY 50
BSNT_04725___ 51 PEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGV 100
|||||||||||||||||||:||||||||||||||||||||||||||||||
RBAM_029160__ 51 PEKYIYDVAGFPKIRAQELVNNLKEQMAKFDQTICLEQAVESVEKQADGV 100
BSNT_04725___ 101 FKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFVDDLQ 150
||||||.|||||||||||||||||||||||||:||||||||||||:|||.
RBAM_029160__ 101 FKLVTNSETHYSKTVIITAGNGAFKPRKLELESAEQYEGKNLHYFIDDLN 150
BSNT_04725___ 151 KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVENLH 200
:|||||||:|||||||||||||||||||||||||||||||||||||||||
RBAM_029160__ 151 QFAGRRVAVLGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVENLH 200
BSNT_04725___ 201 ASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVS 250
.||||||||||||||:|||:||||||||||||||||:|||||||||||||
RBAM_029160__ 201 NSKVNVLTPFVPAELVGEDRIEQLVLEEVKGDRKEIIEIDDLIVNYGFVS 250
BSNT_04725___ 251 SLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGKVNLIASGF 300
|||||||||||||||||||||||||||||||||||||||||||.||||||
RBAM_029160__ 251 SLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGKVKLIASGF 300
BSNT_04725___ 301 GEAPTAVNNAKAYMDPKARVQPLHSTSLFENK 332
|||||||||||||||||||||||||||:||.
RBAM_029160__ 301 GEAPTAVNNAKAYMDPKARVQPLHSTSMFEK- 331
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