Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04721 and RBAM_029130

See DNA alignment / Visit BSNT_04721 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:17
# Commandline: needle
#    -asequence pep-align/BSNT_04721___yuiB.1.9828.seq
#    -bsequence pep-align/RBAM_029130___yuiB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04721___yuiB-RBAM_029130___yuiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04721___yuiB-RBAM_029130___yuiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04721___yuiB
# 2: RBAM_029130___yuiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      88/108 (81.5%)
# Similarity:    97/108 (89.8%)
# Gaps:           2/108 ( 1.9%)
# Score: 444.0
# 
#
#=======================================

BSNT_04721___      1 --MISLPVVIISIVLFFVLFFGIGFLLNMLLRMSWIMAVIYPIVCLFIIS     48
                       :||||||:|||||||||||||||||||||||||||||:||||||||||
RBAM_029130__      1 MFVISLPVVLISIVLFFVLFFGIGFLLNMLLRMSWIMAVVYPIVCLFIIS     50

BSNT_04721___     49 KDKLISYVQSPGESFASLFHRVLSLAAADVLILVSGLAGAIVSGIAINML     98
                     ..|:|||||:|||||.|||.|::|||.|||:||..||||||:|||||..|
RBAM_029130__     51 NKKMISYVQAPGESFQSLFQRIMSLAVADVVILAGGLAGAIMSGIAIKAL    100

BSNT_04721___     99 RKRGYQMF    106
                     ||||||||
RBAM_029130__    101 RKRGYQMF    108


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