Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04721 and RBAM_029130
See
Amino acid alignment /
Visit
BSNT_04721 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence dna-align/BSNT_04721___yuiB.1.9828.seq
# -bsequence dna-align/RBAM_029130___yuiB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04721___yuiB-RBAM_029130___yuiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04721___yuiB-RBAM_029130___yuiB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04721___yuiB
# 2: RBAM_029130___yuiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity: 259/328 (79.0%)
# Similarity: 259/328 (79.0%)
# Gaps: 8/328 ( 2.4%)
# Score: 1031.0
#
#
#=======================================
BSNT_04721___ 1 ------TTGATTAGTCTGCCAGTCGTAATCATCTCAATTGTTTTGTTTTT 44
.||||||||.||||.||.||..|.||||||||.||..|.|||||
RBAM_029130__ 1 ATGTTTGTGATTAGTTTGCCGGTTGTCCTGATCTCAATCGTACTATTTTT 50
BSNT_04721___ 45 TGTCTTGTTTTTTGGCATCGG-TTTCTTATTAAACATGCTGCTGAGAATG 93
.||..|||||||.|||||.|| |||| |.||.|||||||||||.||||||
RBAM_029130__ 51 CGTACTGTTTTTCGGCATAGGCTTTC-TGTTGAACATGCTGCTTAGAATG 99
BSNT_04721___ 94 TCTTGGATTATGGCTGTGATTTATCCGATTGTATGCCTTTTCATTATCAG 143
||.||||||||||||||..|.|||||||||||||||||||||||||||||
RBAM_029130__ 100 TCGTGGATTATGGCTGTTGTCTATCCGATTGTATGCCTTTTCATTATCAG 149
BSNT_04721___ 144 CAAAGATAAGCTGATCAGCTATGTCCAGTCGCCGGGAGAATCCTTTGCCA 193
|||..|.|||.|||||||.||.||.|||.|||||||.|||||||||...|
RBAM_029130__ 150 CAATAAAAAGATGATCAGTTACGTGCAGGCGCCGGGGGAATCCTTTCAAA 199
BSNT_04721___ 194 GCCTGTTTCATCGTGTCTTATCATTAGCGGCTGCCGATGTGCTGATTTTA 243
||||||||||.||..||.|.||||||||||.|||.|||||..|||||||.
RBAM_029130__ 200 GCCTGTTTCAGCGCATCATGTCATTAGCGGTTGCGGATGTCGTGATTTTG 249
BSNT_04721___ 244 GTCAGCGGTTTGGCCGGCGCCATCGTGTCCGGTATAGCGATCAACATGCT 293
|...||||..||||.||.||||||.||||.||.||.||.||.||...|||
RBAM_029130__ 250 GCGGGCGGACTGGCGGGAGCCATCATGTCAGGCATTGCCATAAAGGCGCT 299
BSNT_04721___ 294 CAGAAAAAGAGGATATCAAATGTTTTAA 321
||||||||||||||||||||||||||||
RBAM_029130__ 300 CAGAAAAAGAGGATATCAAATGTTTTAA 327
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.