Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04718 and RBAM_029120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:16
# Commandline: needle
# -asequence pep-align/BSNT_04718___yuiC.1.9828.seq
# -bsequence pep-align/RBAM_029120___yuiC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04718___yuiC-RBAM_029120___yuiC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04718___yuiC-RBAM_029120___yuiC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04718___yuiC
# 2: RBAM_029120___yuiC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 154/217 (71.0%)
# Similarity: 177/217 (81.6%)
# Gaps: 4/217 ( 1.8%)
# Score: 804.0
#
#
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BSNT_04718___ 1 MLNMIRRLLMTCLFLLAFGTTFLSVSGIEAKDLSKWVQEHQEKHLKHAGL 50
:.:|||:.|..|||.|...|:.|::|:|||||:.|:.||:...||:.|.
RBAM_029120__ 1 -MTIIRRVFMIVLFLGACHATYFSITGVEAKDLTNWMTEHRGAVLKNIGT 49
BSNT_04718___ 51 TLKALQQKQTQTTSAAEDKTKPLEEAFDWDEYPVQRVTATGYTAGAESTG 100
..::| |.|....|..:.|||||||||:.||.|:||||||||||||||
RBAM_029120__ 50 PFQSL---QNQPEKKASGRIKPLEEAFDWERYPSQKVTATGYTAGAESTG 96
BSNT_04718___ 101 KNPGDPLYGLTYSGVKVKRDLYSTVAADPSVFPIGTILFIPNYGLGVVAD 150
|:||.|.||:||||||||||||||||||||||||||||||||||.|||||
RBAM_029120__ 97 KSPGHPQYGITYSGVKVKRDLYSTVAADPSVFPIGTILFIPNYGYGVVAD 146
BSNT_04718___ 151 TGSAIKGNRLDLYFETVKDVYNEWGKKTLDVYVIKKGTGKITEDELEKLN 200
|||.|||:||||||:|||||||.|||||||||:||||.|.:|||||.|||
RBAM_029120__ 147 TGSKIKGSRLDLYFDTVKDVYNNWGKKTLDVYMIKKGNGTVTEDELVKLN 196
BSNT_04718___ 201 ETKSLQVFRNQYKTVKE 217
||||:||||||||||||
RBAM_029120__ 197 ETKSMQVFRNQYKTVKE 213
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