Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04712 and RBAM_029060

See DNA alignment / Visit BSNT_04712 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:16
# Commandline: needle
#    -asequence pep-align/BSNT_04712___yuiI.1.9828.seq
#    -bsequence pep-align/RBAM_029060___yuiI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04712___yuiI-RBAM_029060___yuiI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04712___yuiI-RBAM_029060___yuiI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04712___yuiI
# 2: RBAM_029060___yuiI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     175/298 (58.7%)
# Similarity:   211/298 (70.8%)
# Gaps:          18/298 ( 6.0%)
# Score: 921.0
# 
#
#=======================================

BSNT_04712___      1 MKEQTTDRTNG-------GTSNVFTIPGTEVRMMSSRNENRTYHIFISKP     43
                             .:|       ..:..:.:||||||.|.|:. .|||.||:|.|
RBAM_029060__      1 --------MDGKQIKRGFAPAGRYAVPGTEVREMRSKG-GRTYRIFVSFP     41

BSNT_04712___     44 STPPPPAGYPVIYLLDANSVFGTMTEAVRIQGRRPEKTGVIPAVIVGIGY     93
                     ...||.:|:|||||||||||||||.||:|:|.||||||||:|||||||||
RBAM_029060__     42 QEEPPASGFPVIYLLDANSVFGTMAEALRVQSRRPEKTGVVPAVIVGIGY     91

BSNT_04712___     94 ETAEPFSSARHRDFTMPTAQSKLPERPDGREWPEHGGAEGFFRFIEEDLK    143
                     .|.:|||:.||.|||||.::|:||..|.|..|||.||||.|..||||::|
RBAM_029060__     92 PTDQPFSAERHSDFTMPLSESELPVHPRGAAWPEQGGAEAFLSFIEEEVK    141

BSNT_04712___    144 PEIERDYQIDKKRQTIFGHSLGGLFVLQVLLTKPDAFQTYIAGSPSIHWN    193
                     |.:||||.||:.||||||||||||||||||||:||.||||:|||||||||
RBAM_029060__    142 PAMERDYPIDRGRQTIFGHSLGGLFVLQVLLTRPDMFQTYVAGSPSIHWN    191

BSNT_04712___    194 KPFILEKTDHFVSLTKKNNQPINILLAAGELEQHHKSRMNDNARELYERL    243
                     |.||.||.:.........|..:::||||||:|:.||||:..:|..||..|
RBAM_029060__    192 KRFIQEKAERLSDRLSAENLQVSVLLAAGEIEKTHKSRIPQHAEALYSLL    241

BSNT_04712___    244 AVLSEQGIRAEFCEFSGEGHISVLPVLVSRALRFALHPDGPHLSMG--    289
                     :...:.|:|||:.||.|||||||||||:||||||.|:|.|||....  
RBAM_029060__    242 SGFEDDGVRAEYSEFEGEGHISVLPVLISRALRFCLNPGGPHTPYSPA    289


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