Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04710 and RBAM_029050

See DNA alignment / Visit BSNT_04710 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:16
# Commandline: needle
#    -asequence pep-align/BSNT_04710___dhbA.1.9828.seq
#    -bsequence pep-align/RBAM_029050___dhbA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04710___dhbA-RBAM_029050___dhbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04710___dhbA-RBAM_029050___dhbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04710___dhbA
# 2: RBAM_029050___dhbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     181/261 (69.3%)
# Similarity:   218/261 (83.5%)
# Gaps:           5/261 ( 1.9%)
# Score: 933.0
# 
#
#=======================================

BSNT_04710___      1 MNAKSIEGKIAFITGAAQGIGEAVARTLASQGAHIAAVDYNPEKLEKVVS     50
                          ::||.|.:||||||||||.|..||.||.::||:|.|.:.|..:..
RBAM_029050__      1 -----MKGKTAVVTGAAQGIGEATALALAEQGVNVAAIDTNEDLLLGLTD     45

BSNT_04710___     51 SLKAEGRHAEAFPADVRDSAAIDEITARIEREMGPIDILVNVAGVLRPGL    100
                     .|:.:|..|:.|.|||.||||:::|.|.:||:||||:||.|||||||||.
RBAM_029050__     46 RLRQKGVQAQGFAADVSDSAAVNDIIAAVERDMGPIEILANVAGVLRPGP     95

BSNT_04710___    101 IHSLSDEEWEATFSVNSTGVFNASRSVSKYMMDRRSGSIVTVGSNAAGVP    150
                     :.|||||:|:.||||||||||:.||:||:||::|:.|:||||||||||||
RBAM_029050__     96 VQSLSDEDWDQTFSVNSTGVFHVSRAVSRYMIERKKGAIVTVGSNAAGVP    145

BSNT_04710___    151 RTSMAAYASSKAAAVMFTKCLGLELAEYNIRCNIVSPGSTETDMQWSLWA    200
                     |.||||||:|||||||||||||||||.::||||||||||||||||.:||.
RBAM_029050__    146 RASMAAYAASKAAAVMFTKCLGLELAAHHIRCNIVSPGSTETDMQRALWQ    195

BSNT_04710___    201 DENGAEQVIKGSLETFKTGIPLKKLAKPSDIADAVLFLVSGQAGHITMHN    250
                     |||||..||:|||:|:||||||:|||||||||:|||||.|.||.|||||:
RBAM_029050__    196 DENGARGVIRGSLDTYKTGIPLQKLAKPSDIANAVLFLASEQANHITMHD    245

BSNT_04710___    251 LCVDGGATLGV    261
                     |||||||||||
RBAM_029050__    246 LCVDGGATLGV    256


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.