Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04708 and RBAM_029040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:15
# Commandline: needle
# -asequence pep-align/BSNT_04708___dhbC.1.9828.seq
# -bsequence pep-align/RBAM_029040___dhbC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04708___dhbC-RBAM_029040___dhbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04708___dhbC-RBAM_029040___dhbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04708___dhbC
# 2: RBAM_029040___dhbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 400
# Identity: 257/400 (64.2%)
# Similarity: 313/400 (78.2%)
# Gaps: 4/400 ( 1.0%)
# Score: 1350.0
#
#
#=======================================
BSNT_04708___ 1 MLDQNVITETKAEHLLHEYQPGAFFLASPHRVLLAKGICEIVPEADGQNQ 50
|.:|:::.|..|:.:|..|:|||||||||...:||:|:...||:.|.:||
RBAM_029040__ 1 MTNQHLLAEVSAKEVLDAYKPGAFFLASPKSTMLAEGMFAEVPDTDAENQ 50
BSNT_04708___ 51 METLSGRIAETLRQAKQSGQSRPLVVGAVPFDQVKAARLVVPEEVRWSGP 100
:::|..|:.:||.:|||:|...|:..||:|||..||:||.||:.|..:||
RBAM_029040__ 51 LDSLPERVRQTLLEAKQAGIKHPIAAGAIPFDGRKASRLFVPKNVHTAGP 100
BSNT_04708___ 101 LQFDHEEKEQQAGHTYHIKPVPEPEDYKNGVEQGLTRIADGTLSKIVLSR 150
|.|.....|:...:||.|:||||||.:.:|||||:..|.||.||||||||
RBAM_029040__ 101 LSFAESSAEKPQSNTYDIRPVPEPEGFMSGVEQGVFSITDGPLSKIVLSR 150
BSNT_04708___ 151 SLHLTSPEPIQTDELLRHLAQHNSHGYTFAADVSSQEETSPRRTLLGASP 200
:||||:.:.|...:.::||||||..||||||||:...|| |:||.||||
RBAM_029040__ 151 TLHLTAEKDIDIPQAVKHLAQHNPRGYTFAADVTGTSET--RKTLFGASP 198
BSNT_04708___ 201 ELLVSRMGTQVVSNPLAGSRPRSNDPVEDQRRAAELLSSAKDLHEHAVVA 250
|||:|:.||.::|||||||||||.||.||||||.|||.|||||||||||.
RBAM_029040__ 199 ELLLSKNGTSILSNPLAGSRPRSTDPAEDQRRAEELLQSAKDLHEHAVVV 248
BSNT_04708___ 251 DAVAAALRPFCRTLEVPEKPSLIKTETMWHLSSVIKGELSDPSVTALELA 300
.||||||:||||.|:|||||||||||.|||||:.:||||.|||.|:||||
RBAM_029040__ 249 AAVAAALKPFCRVLDVPEKPSLIKTEAMWHLSTEVKGELRDPSTTSLELA 298
BSNT_04708___ 301 AALHPTPAVCGTPTDLAREAILSIEPFDRGFFTGMVGWCDDAGDGEWIVT 350
.||||||||||||||.|||||..||||||.|:|||.||||..|:||||:.
RBAM_029040__ 299 IALHPTPAVCGTPTDAAREAIQDIEPFDRNFYTGMAGWCDAEGNGEWIIA 348
BSNT_04708___ 351 IRCAEAEERSLRLYAGAGVVAGSKPEDELQETSAKFRTMLRAMGV--DHI 398
:||||||.|||||:||||:||||||:|||.||||||||||||||: |.:
RBAM_029040__ 349 LRCAEAETRSLRLFAGAGIVAGSKPQDELDETSAKFRTMLRAMGLYQDEL 398
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