Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04707 and RBAM_029030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:15
# Commandline: needle
# -asequence pep-align/BSNT_04707___dhbE.1.9828.seq
# -bsequence pep-align/RBAM_029030___dhbE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04707___dhbE-RBAM_029030___dhbE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04707___dhbE-RBAM_029030___dhbE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04707___dhbE
# 2: RBAM_029030___dhbE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity: 432/541 (79.9%)
# Similarity: 476/541 (88.0%)
# Gaps: 2/541 ( 0.4%)
# Score: 2287.0
#
#
#=======================================
BSNT_04707___ 1 MLKGFTPWPDELAETYRKNGCWAGETFGDLLRDRAAKYGDRIAITCGNTH 50
||.||||||:|.|:.|||:|||.|||||.:|::|||.||::.|:||.:.|
RBAM_029030__ 1 MLTGFTPWPEEWADKYRKDGCWKGETFGGMLKERAALYGNQTAVTCKDVH 50
BSNT_04707___ 51 WSYQELDTRVDRLAAGFQKLGIQQMDRVVVQLPNIKEFFEVIFALFRLGA 100
|:|:|||.|.||||||..|||||:.||||||||||.||||||||||||||
RBAM_029030__ 51 WTYKELDERADRLAAGLHKLGIQKEDRVVVQLPNIAEFFEVIFALFRLGA 100
BSNT_04707___ 101 LPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRTLARQVQSKLPT 150
|||||||||||||||||||||||.||||||.:||||||.|||||:.|||.
RBAM_029030__ 101 LPVFALPSHRSSEITYFCEFAEAKAYIIPDMHSGFDYRALARQVKDKLPD 150
BSNT_04707___ 151 LKNIIVAGEAEEFLPLEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLI 200
|.::|||||||||..|..||.|||:|.::..::|||||||||||||||||
RBAM_029030__ 151 LAHVIVAGEAEEFQELSSLHREPVQLEDISPAEVAFLQLSGGSTGLSKLI 200
BSNT_04707___ 201 PRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAG 250
|||||||||||:.|.|:|.||..:|||||||.|||||||||||||.||||
RBAM_029030__ 201 PRTHDDYIYSLRISAEICGLDQHSVYLAALPTAHNYPLSSPGVLGTLYAG 250
BSNT_04707___ 251 GRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRCDDLSSL 300
|||||||:|||||.|||||:|:|||||||||||||||||:.||.||||||
RBAM_029030__ 251 GRVVLSPTPSPDDCFPLIEKERVTITALVPPLAMVWMDASGSRSDDLSSL 300
BSNT_04707___ 301 QVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAEGLVNYTRLDDPEEIIV 350
|||||||||||||||||||:.|||||||||||||||||||||||||||||
RBAM_029030__ 301 QVLQVGGAKFSAEAARRVKSAFGCTLQQVFGMAEGLVNYTRLDDPEEIIV 350
BSNT_04707___ 351 NTQGKPMSPYDEVRVWDDHDRDVKPGETGHLLTRGPYTIRGYYKAEEHNA 400
||||:||||:|||||.||..|||.|||.|||.|||||||||||||.|||.
RBAM_029030__ 351 NTQGRPMSPFDEVRVLDDDGRDVAPGEAGHLFTRGPYTIRGYYKAPEHNE 400
BSNT_04707___ 401 ASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLL 450
.|||.||||:|||||:||.||||:|||||||||||||||:||||||||||
RBAM_029030__ 401 RSFTADGFYQTGDIVKLTADGYIIVEGRAKDQINRGGEKIAAEEVENHLL 450
BSNT_04707___ 451 AHPAVHDAAMVSMPDQFLGERSCVFIIPRDEAPKAAELKAFLRERGLAAY 500
|||||||||||||||.|||||||||:||:.||||..||||||||||||||
RBAM_029030__ 451 AHPAVHDAAMVSMPDDFLGERSCVFVIPKGEAPKPGELKAFLRERGLAAY 500
BSNT_04707___ 501 KIPDRVEFVESFPQTGVGKVSKKALREAISEKLLAGAKK-- 539
|||||:||:.|||:|||||||||.|||.|::|:.....|
RBAM_029030__ 501 KIPDRIEFIASFPKTGVGKVSKKDLRETIAQKVKPAEIKQS 541
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