Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04706 and RBAM_029020

See DNA alignment / Visit BSNT_04706 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:15
# Commandline: needle
#    -asequence pep-align/BSNT_04706___dhbB.1.9828.seq
#    -bsequence pep-align/RBAM_029020___dhbB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04706___dhbB-RBAM_029020___dhbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04706___dhbB-RBAM_029020___dhbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04706___dhbB
# 2: RBAM_029020___dhbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     222/314 (70.7%)
# Similarity:   264/314 (84.1%)
# Gaps:           8/314 ( 2.5%)
# Score: 1180.0
# 
#
#=======================================

BSNT_04706___      1 MAIPAIQPYQMPTASDMPQNKVSWVPDPNRAVLLIHDMQNYFVDAFTAGA     50
                     ||||:|..|.:|||||||:|||||..:|.|||||||||||||||||..|.
RBAM_029020__      1 MAIPSIPAYALPTASDMPENKVSWTLNPKRAVLLIHDMQNYFVDAFAKGE     50

BSNT_04706___     51 SPVIELSANIRKLKNQCVQLGIPVVYTAQPGSQNPDDRALLTDFWGPGLN    100
                     :|:.|.|.||:|:|.||..||||||||||||||:|.|||||||||||||.
RBAM_029020__     51 APITEASQNIKKIKEQCKALGIPVVYTAQPGSQDPADRALLTDFWGPGLK    100

BSNT_04706___    101 SGPYEEKIITELAPEDDDLVLTKWRYSAFKRTNLLEMMRKEGRDQLIITG    150
                     |||||||:|.||||:|.|:|||||||||||||||||:||:.|||||:|||
RBAM_029020__    101 SGPYEEKVIPELAPDDQDIVLTKWRYSAFKRTNLLEIMRESGRDQLMITG    150

BSNT_04706___    151 IYAHIGCLVTACEAFMEDIKAFLVGDAVADFSLEKHQMALDYAAGRCAFT    200
                     ||||||||||||||||:||::|.:||||||||.|||:||::||:.|||:|
RBAM_029020__    151 IYAHIGCLVTACEAFMDDIQSFFIGDAVADFSSEKHKMAIEYASQRCAYT    200

BSNT_04706___    201 VMTDSLLDQLQNAPAD--VQKTSANTGKKNVFTCENIRKQIAELLQKTPE    248
                     .:|:.:|:.|..||..  .:|.||      |.|.:.:|:|||.:||::|.
RBAM_029020__    201 ALTNEVLELLGGAPVSGGEEKVSA------VLTKDRVREQIAAILQESPS    244

BSNT_04706___    249 DITDQEDLLDRGLDSVRIMTLVEQWRREGAEVTFVELAERPTIEEWQKLL    298
                     ||.|.||||||||||||||:|||.|||:|||||||||||.||:|||.:||
RBAM_029020__    245 DIPDHEDLLDRGLDSVRIMSLVELWRRDGAEVTFVELAENPTLEEWWRLL    294

BSNT_04706___    299 TTRSQQVLPNADYL    312
                     ::|||:||||||||
RBAM_029020__    295 SSRSQKVLPNADYL    308


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