Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04696 and RBAM_028970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:12
# Commandline: needle
# -asequence pep-align/BSNT_04696___yukF.1.9828.seq
# -bsequence pep-align/RBAM_028970___yukF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04696___yukF-RBAM_028970___yukF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04696___yukF-RBAM_028970___yukF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04696___yukF
# 2: RBAM_028970___yukF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 409
# Identity: 342/409 (83.6%)
# Similarity: 374/409 (91.4%)
# Gaps: 2/409 ( 0.5%)
# Score: 1769.0
#
#
#=======================================
BSNT_04696___ 1 --MPNDPFKYSFDRLEDVADHISDVLRCPITIEDVNHKLLAYSTHSDCTD 48
.|.||||||||||||||||||:||:|||||||||||||||||||||||
RBAM_028970__ 1 MTNPKDPFKYSFDRLEDVADHISEVLQCPITIEDVNHKLLAYSTHSDCTD 50
BSNT_04696___ 49 PARTSTIIGRRVPEKVINKLWKDGTIPALLKTDQPIRVKQIDEVGLSNRV 98
||||||||||||||||||||||||||||||||||||:||:||||||||||
RBAM_028970__ 51 PARTSTIIGRRVPEKVINKLWKDGTIPALLKTDQPIKVKEIDEVGLSNRV 100
BSNT_04696___ 99 AISIWKNKQVLGFIWALEIQKTLSDEDLLTLQMAAKAVKNKLLKLQIRKT 148
|||||||.|||||||||||:|.|:||||.|||:|||||:||||.||||||
RBAM_028970__ 101 AISIWKNSQVLGFIWALEIKKKLNDEDLKTLQLAAKAVRNKLLHLQIRKT 150
BSNT_04696___ 149 KNEERSQEFFWKMLTGHIHQEDDMADGFHKLGMAAPSEFSVMIIRINGEL 198
|.|||.||||||||||||:||.:||:||||||||.||.|||||||::.||
RBAM_028970__ 151 KIEERGQEFFWKMLTGHIYQEAEMAEGFHKLGMALPSVFSVMIIRLHDEL 200
BSNT_04696___ 199 TEKIEQQLQYLQETTQQVYVLLATVDSNELIILTSPKTDHPFQDLKQFAL 248
|||.|||||||||||||::|:||||||||||:|.:||||.||:|:|.|||
RBAM_028970__ 201 TEKTEQQLQYLQETTQQIHVMLATVDSNELILLAAPKTDQPFKDVKHFAL 250
BSNT_04696___ 249 STQKQLKERYKIEDVSIAFGGIYNSISFVSRSYQEALSVLKTKERFAEET 298
..||||||||||||.|||.||||.|||:|.|||||||||||.||||..||
RBAM_028970__ 251 HIQKQLKERYKIEDASIAVGGIYESISYVYRSYQEALSVLKAKERFVRET 300
BSNT_04696___ 299 KHFFSFSELGIYQYLDVLNEKRKQAGHYNYSLSKLEQYDRDHQSNLVETL 348
||.|||||||||||||||:||||.:|:.||||||||||||:||:::|:||
RBAM_028970__ 301 KHLFSFSELGIYQYLDVLDEKRKHSGYMNYSLSKLEQYDREHQADMVKTL 350
BSNT_04696___ 349 ERFIEADSNVNTASKLLNIHVNTLNYRLKRISQIAEIDLKNVNQKFTIYL 398
|.||:||||||||:|.||||||||||||||||.||||||||||:||||||
RBAM_028970__ 351 EHFIDADSNVNTAAKALNIHVNTLNYRLKRISHIAEIDLKNVNEKFTIYL 400
BSNT_04696___ 399 DIKLRHMDL 407
|||||.||.
RBAM_028970__ 401 DIKLRSMDS 409
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