Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04693 and RBAM_028950

See DNA alignment / Visit BSNT_04693 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:11
# Commandline: needle
#    -asequence pep-align/BSNT_04693___yukD.1.9828.seq
#    -bsequence pep-align/RBAM_028950___yukD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04693___yukD-RBAM_028950___yukD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04693___yukD-RBAM_028950___yukD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04693___yukD
# 2: RBAM_028950___yukD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      70/81 (86.4%)
# Similarity:    73/81 (90.1%)
# Gaps:           2/81 ( 2.5%)
# Score: 360.0
# 
#
#=======================================

BSNT_04693___      1 --MYIDITIDLKHYNGSVFDLRLSDYHPVKKVIDIAWQAQSVSMPPREGH     48
                       |||||||||.|||||||||||||||.||||||||.|||.||:|||||:
RBAM_028950__      1 MNMYIDITIDLTHYNGSVFDLRLSDYHSVKKVIDIARQAQHVSVPPREGY     50

BSNT_04693___     49 WIRVVNKDKVFSGECKLSDCGITNGDRLEIL     79
                     |||||||:.|||||.||||||||||||||||
RBAM_028950__     51 WIRVVNKETVFSGEQKLSDCGITNGDRLEIL     81


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