Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04686 and RBAM_028910

See DNA alignment / Visit BSNT_04686 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:09
# Commandline: needle
#    -asequence pep-align/BSNT_04686___yueC.1.9828.seq
#    -bsequence pep-align/RBAM_028910___yueC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04686___yueC-RBAM_028910___yueC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04686___yueC-RBAM_028910___yueC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04686___yueC
# 2: RBAM_028910___yueC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     100/160 (62.5%)
# Similarity:   125/160 (78.1%)
# Gaps:           4/160 ( 2.5%)
# Score: 472.0
# 
#
#=======================================

BSNT_04686___      1 MEKGIMICMLSFSLFIPSAAAAQTEENTDVAPNQYEKKDIEIDTNYLHED     50
                     ||||:::..|||.||:|.|||| .||||||.||:||||||||.|:|||:|
RBAM_028910__      1 MEKGLLLFALSFFLFLPQAAAA-NEENTDVKPNEYEKKDIEIRTDYLHDD     49

BSNT_04686___     51 TYYEEKTELPEEQKDITFD-KPKDKDAELIKDLFTSTNAEDSNTIAAQSK     99
                     .|.||||.||:|||||||| :.::.|.:||..||||::.| .|||.||||
RBAM_028910__     50 AYSEEKTALPKEQKDITFDQQAENPDDKLISKLFTSSDTE-PNTIKAQSK     98

BSNT_04686___    100 QLGITFAEKPMTKTSSTETEDEQETSSLLLPMIYVVLILLGIAGIVFLIP    149
                     :||||||| |..:.:|.:.|.|::.:|.|||:||.||||||||.:::|||
RBAM_028910__     99 KLGITFAE-PAVRHTSADMETEEKKTSYLLPVIYAVLILLGIAAMIYLIP    147

BSNT_04686___    150 KVTAQENKKA    159
                     ||||||..|.
RBAM_028910__    148 KVTAQEKAKR    157


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