Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04685 and RBAM_028900

See DNA alignment / Visit BSNT_04685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:09
# Commandline: needle
#    -asequence pep-align/BSNT_04685___yueD.1.9828.seq
#    -bsequence pep-align/RBAM_028900___yueD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04685___yueD-RBAM_028900___yueD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04685___yueD-RBAM_028900___yueD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04685___yueD
# 2: RBAM_028900___yueD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     168/243 (69.1%)
# Similarity:   199/243 (81.9%)
# Gaps:           0/243 ( 0.0%)
# Score: 862.0
# 
#
#=======================================

BSNT_04685___      1 MELYIITGASKGLGQAIALQALEKGHEVHALSRTKTDVSHKKLTQHQIDL     50
                     |:.::|||||||||:|:..|||::|.||.|||||.:....:.||::.:||
RBAM_028900__      1 MQFFLITGASKGLGRALTEQALQEGAEVAALSRTISGEKREGLTEYSVDL     50

BSNT_04685___     51 INLEEAEQQFETLLSSIDSDRYSGITLINNAGMVTPIKRAGEASLDELQR    100
                     .:|.:..:|.:.:|...:...||.:|||||||||.|||||.|||.:||.|
RBAM_028900__     51 TDLADTGRQMKAILDQAEEKGYSAVTLINNAGMVEPIKRAKEASAEELNR    100

BSNT_04685___    101 HYQLNLTAPVLLSQLFTKRFASYSGKKTVVNITSGAAKNPYKGWSAYCSS    150
                     ||.|||||||||||:|||.|.::||.||:|||||||||||||||||||||
RBAM_028900__    101 HYTLNLTAPVLLSQMFTKHFEAFSGSKTIVNITSGAAKNPYKGWSAYCSS    150

BSNT_04685___    151 KAGLDMFTRTFGFEQEDEELPVNMISFSPGVMDTEMQAVIRSSSKKDFHH    200
                     ||||||||||||||||||||||.|||||||||||:||||||||||:|||.
RBAM_028900__    151 KAGLDMFTRTFGFEQEDEELPVRMISFSPGVMDTDMQAVIRSSSKEDFHD    200

BSNT_04685___    201 IERFRKLNETGSLRSPDFIAGTLLSLLEKGTENGRIYDIKEFL    243
                     |||||.|.||.:||||::|||.:.||:....||||||||||||
RBAM_028900__    201 IERFRNLKETKNLRSPEYIAGVIHSLIAGEPENGRIYDIKEFL    243


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