Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04678 and RBAM_028880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:09
# Commandline: needle
# -asequence pep-align/BSNT_04678___yueF.1.9828.seq
# -bsequence pep-align/RBAM_028880___yueF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04678___yueF-RBAM_028880___yueF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04678___yueF-RBAM_028880___yueF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04678___yueF
# 2: RBAM_028880___yueF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 305/451 (67.6%)
# Similarity: 337/451 (74.7%)
# Gaps: 83/451 (18.4%)
# Score: 1565.0
#
#
#=======================================
BSNT_04678___ 0 -------------------------------------------------- 0
RBAM_028880__ 1 MMPLRITSPLKKRMTVYFISETAMWFPSCLIIPNACNSPNKAQTGGGPIE 50
BSNT_04678___ 1 --------------------------------MLKSKVHFWTLQILFVLL 18
:|||||||||||||.|||
RBAM_028880__ 51 PRCVFFFEIHRCTAAFFGTITVQVHMTIGGNRLLKSKVHFWTLQILLVLL 100
BSNT_04678___ 19 IIFVATKVSFVFQPFIVFISTLFFPMLIAGILYFIFNPVVRLLEKKIPRT 68
||:|:|||||:||||..||:|||||:||:|||:|||||:|||||||||||
RBAM_028880__ 101 IIYVSTKVSFIFQPFFGFITTLFFPILISGILFFIFNPIVRLLEKKIPRT 150
BSNT_04678___ 69 LSILLIYLLFIGLLAFISASVGPIITSQVTGLFNNLPDYIKQIQALTKDL 118
|:||||||:||||:||:..::|||:.||||||.||.||||.|||.||..|
RBAM_028880__ 151 LAILLIYLVFIGLIAFMFTAIGPIVASQVTGLINNFPDYIHQIQVLTAQL 200
BSNT_04678___ 119 SHSQWFTWMMNQDYVSISKIEQSLTSFLQNLPQNITSSLSAVFGVVTNIT 168
|||:||||||.||||||.||:||||.|||:||||||:|||||||||||||
RBAM_028880__ 201 SHSKWFTWMMTQDYVSIEKIQQSLTGFLQSLPQNITASLSAVFGVVTNIT 250
BSNT_04678___ 169 LVIITVPFILFYMLKDGHRFPHLAVKILPASYRTEGLKIFKDLSDTLAAY 218
||:||||||||||||||.|||.|||||||.|||.||.|||.||..|||||
RBAM_028880__ 251 LVVITVPFILFYMLKDGRRFPLLAVKILPTSYRAEGRKIFNDLYVTLAAY 300
BSNT_04678___ 219 FQGQLLICLFVGTACFIGYLIAGLPYALILGIVMAITNIIPYVGPFLGAA 268
|||||||||||||||||||.|.||.||||||:|:|:||||||:|||||||
RBAM_028880__ 301 FQGQLLICLFVGTACFIGYSIIGLQYALILGMVIAVTNIIPYLGPFLGAA 350
BSNT_04678___ 269 PAVIVGFMDSPAKALFAIIVVVIVQQLDGNLLSPLVIGKRLNTHPLTIIL 318
||||:.|||||||||||:||||:|||||||||||||||||||||||||||
RBAM_028880__ 351 PAVIIAFMDSPAKALFAVIVVVVVQQLDGNLLSPLVIGKRLNTHPLTIIL 400
BSNT_04678___ 319 LLIGAGSFGGILGMILAVPVYAVVKAFFLNIVRLIKLRQRSRLEENAKPA 368
||||||||||||.||||||||||:|||.|||||||||||||:||::.||.
RBAM_028880__ 401 LLIGAGSFGGILAMILAVPVYAVLKAFVLNIVRLIKLRQRSKLEDSRKPK 450
BSNT_04678___ 369 E 369
RBAM_028880__ 450 - 450
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