Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04673 and RBAM_028850

See DNA alignment / Visit BSNT_04673 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:09
# Commandline: needle
#    -asequence pep-align/BSNT_04673___yueI.1.9828.seq
#    -bsequence pep-align/RBAM_028850___yueI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04673___yueI-RBAM_028850___yueI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04673___yueI-RBAM_028850___yueI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04673___yueI
# 2: RBAM_028850___yueI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:      84/132 (63.6%)
# Similarity:   106/132 (80.3%)
# Gaps:           0/132 ( 0.0%)
# Score: 446.0
# 
#
#=======================================

BSNT_04673___      1 MSEDKMDLYLQQGMYGPLETKPDERHLFLGSLRERVVLALTKGQVLRSKP     50
                     ||:..:||||||||||||:|||||||||||||||||::||||||||:.:|
RBAM_028850__      1 MSDKTVDLYLQQGMYGPLQTKPDERHLFLGSLRERVIIALTKGQVLQKQP     50

BSNT_04673___     51 YKEAEHELKNSHNVTLLVNGELQYQSYSPYIQMANRYGVPFKIVSDLQFH    100
                     |:|.:..||:..:..|.:||.|.|.:||||:::|...||...::|||||.
RBAM_028850__     51 YEEVKQALKSRKDAVLYINGRLPYHAYSPYMKLAALAGVRSSVISDLQFE    100

BSNT_04673___    101 TPLGLVIAADIAVNRELIYIQDDIYNRSVLKS    132
                     ||||||.|||.|||.:.||:||||:.||:|||
RBAM_028850__    101 TPLGLVFAADYAVNLDGIYVQDDIFQRSLLKS    132


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