Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04669 and RBAM_028810

See DNA alignment / Visit BSNT_04669 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:08
# Commandline: needle
#    -asequence pep-align/BSNT_04669___yuzC.1.9828.seq
#    -bsequence pep-align/RBAM_028810___yuzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04669___yuzC-RBAM_028810___yuzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04669___yuzC-RBAM_028810___yuzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04669___yuzC
# 2: RBAM_028810___yuzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      57/123 (46.3%)
# Similarity:    78/123 (63.4%)
# Gaps:          11/123 ( 8.9%)
# Score: 288.0
# 
#
#=======================================

BSNT_04669___      1 MRYRYPWFYVYPYEVRRP-PAPANNIDTFIRSARQAAGIFADAQLVLGRI     49
                     |.|.||.|.|:....|.| |:|..:.|....||::|||:..||:|:|.|:
RBAM_028810__      1 MHYLYPCFPVFAAPYRHPAPSPPVHADILTASAKEAAGMLEDARLLLARL     50

BSNT_04669___     50 AGSRELSRRILTAAEQSDKQTIKRLIKQMGVRHEVDTVFNPDGIYISLIG     99
                     :.|:||:|||||||:.||...:||||||.|::.:.|..:|||||.:||:.
RBAM_028810__     51 SASKELARRILTAAQSSDTAAVKRLIKQTGIKTDFDVTYNPDGIRVSLVR    100

BSNT_04669___    100 TQSRIILALRWSEDRNHFASIRL    122
                     .|||.|:|||||.          
RBAM_028810__    101 EQSRFIIALRWSA----------    113


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