Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04658 and RBAM_028730

See DNA alignment / Visit BSNT_04658 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:07
# Commandline: needle
#    -asequence pep-align/BSNT_04658___mrpF.1.9828.seq
#    -bsequence pep-align/RBAM_028730___mrpF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04658___mrpF-RBAM_028730___mrpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04658___mrpF-RBAM_028730___mrpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04658___mrpF
# 2: RBAM_028730___mrpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 94
# Identity:      85/94 (90.4%)
# Similarity:    90/94 (95.7%)
# Gaps:           0/94 ( 0.0%)
# Score: 412.0
# 
#
#=======================================

BSNT_04658___      1 MFTLILQIALGIMAVSTFLYVIRVIKGPTVPDRVVALDAIGINLIAITAL     50
                     |||.|||::||||||||.|||||||||||:||||||||.|||||||:|||
RBAM_028730__      1 MFTFILQLSLGIMAVSTLLYVIRVIKGPTIPDRVVALDGIGINLIAMTAL     50

BSNT_04658___     51 VSILLKTSAFLDIILLLGILSFIGTIAFSKFLEKGEIIENDRNR     94
                     |||||.||||||||||||||||||||||:|||||||||||||||
RBAM_028730__     51 VSILLNTSAFLDIILLLGILSFIGTIAFAKFLEKGEIIENDRNR     94


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