Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04658 and RBAM_028730

See Amino acid alignment / Visit BSNT_04658 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:07
# Commandline: needle
#    -asequence dna-align/BSNT_04658___mrpF.1.9828.seq
#    -bsequence dna-align/RBAM_028730___mrpF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04658___mrpF-RBAM_028730___mrpF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04658___mrpF-RBAM_028730___mrpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04658___mrpF
# 2: RBAM_028730___mrpF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     230/286 (80.4%)
# Similarity:   230/286 (80.4%)
# Gaps:           2/286 ( 0.7%)
# Score: 914.0
# 
#
#=======================================

BSNT_04658___      1 ATGTTTACGCTGATCCTGCAAATCGCGCTCGGCATTATGGCAGTGTCTAC     50
                     |||||||||.|.||.||||||.|..|.||||||||||||||.||.||.||
RBAM_028730__      1 ATGTTTACGTTTATTCTGCAATTATCACTCGGCATTATGGCGGTTTCGAC     50

BSNT_04658___     51 CTTTTTGTATGTCATTCGTGTCATTAAAGGGCCGACTGTGCCTGACCGGG    100
                     ..||.||||.||||||||.|||||.||||||||.||..|.||.|||||||
RBAM_028730__     51 TCTTCTGTACGTCATTCGCGTCATAAAAGGGCCTACGATACCGGACCGGG    100

BSNT_04658___    101 TGGTGGCTCTGGATGCAATCGGCATCAATCTGATCGCAATCACGGCGCTT    150
                     |.||.||.||.||||..||||||||.||||||||.||.||.||.||||||
RBAM_028730__    101 TCGTCGCGCTTGATGGGATCGGCATTAATCTGATTGCCATGACCGCGCTT    150

BSNT_04658___    151 GTCTCCATTTTGCTGAAA-ACAAGTGCGTTTTTGGATATTATTTTGCTGC    199
                     ||.||||||.| ||.||| |||...||.||||||||.||.|||.||||||
RBAM_028730__    151 GTATCCATTCT-CTTAAACACATCGGCCTTTTTGGACATCATTCTGCTGC    199

BSNT_04658___    200 TGGGGATTTTATCGTTTATCGGAACAATCGCATTTTCCAAGTTCCTGGAG    249
                     |.||.|||||||||||||||||.||.||.||.|||.|.|||||..|||||
RBAM_028730__    200 TCGGCATTTTATCGTTTATCGGCACGATTGCCTTTGCTAAGTTTTTGGAG    249

BSNT_04658___    250 AAAGGAGAGATTATCGAAAATGATCGAAACCGCTAA    285
                     |||||||||||||||||||||||||||||.||.|||
RBAM_028730__    250 AAAGGAGAGATTATCGAAAATGATCGAAATCGTTAA    285


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