Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04656 and RBAM_028720

See DNA alignment / Visit BSNT_04656 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:07
# Commandline: needle
#    -asequence pep-align/BSNT_04656___mrpE.1.9828.seq
#    -bsequence pep-align/RBAM_028720___mrpE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04656___mrpE-RBAM_028720___mrpE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04656___mrpE-RBAM_028720___mrpE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04656___mrpE
# 2: RBAM_028720___mrpE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     132/158 (83.5%)
# Similarity:   147/158 (93.0%)
# Gaps:           0/158 ( 0.0%)
# Score: 681.0
# 
#
#=======================================

BSNT_04656___      1 MAFQILLNVFLAFCWMFLSNSPSAAGFITGYILGMLSLFFFRRFFTRQFY     50
                     ||||:||||.||.|||||:||.|||||:||:|.|:.:||||||||:|.||
RBAM_028720__      1 MAFQLLLNVLLAVCWMFLTNSLSAAGFMTGFIAGLAALFFFRRFFSRPFY     50

BSNT_04656___     51 LWKLISIIKLCFIFIKELYLANVSVMKSVLSPKLNIRPGIFAFKTELTKD    100
                     :||:.|:|||..|||||||||||||:|:|:||||||||||||||||||:|
RBAM_028720__     51 IWKIWSVIKLALIFIKELYLANVSVLKTVISPKLNIRPGIFAFKTELTED    100

BSNT_04656___    101 WEITLLSLLITLTPGTLVMDISDDRTILYIHAMDIEDAEKAIFDIRESFE    150
                     |||||||||||||||||||||||||:||||||||||||||||.|||.|||
RBAM_028720__    101 WEITLLSLLITLTPGTLVMDISDDRSILYIHAMDIEDAEKAIHDIRVSFE    150

BSNT_04656___    151 KAIQEVSR    158
                     ||||||||
RBAM_028720__    151 KAIQEVSR    158


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