Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04656 and RBAM_028720

See Amino acid alignment / Visit BSNT_04656 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:07
# Commandline: needle
#    -asequence dna-align/BSNT_04656___mrpE.1.9828.seq
#    -bsequence dna-align/RBAM_028720___mrpE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04656___mrpE-RBAM_028720___mrpE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04656___mrpE-RBAM_028720___mrpE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04656___mrpE
# 2: RBAM_028720___mrpE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity:     362/482 (75.1%)
# Similarity:   362/482 (75.1%)
# Gaps:          10/482 ( 2.1%)
# Score: 1327.0
# 
#
#=======================================

BSNT_04656___      1 ATGGCTTTTCAAATTTTATTAAATGTGTTTCTCGCTTTTTGCTGGATGTT     50
                     ||||||||||||.|.|||||||||||..||||||||.|||||||||||||
RBAM_028720__      1 ATGGCTTTTCAACTATTATTAAATGTTCTTCTCGCTGTTTGCTGGATGTT     50

BSNT_04656___     51 CTTAAGCAACAGTCCAAGCGCCGCAGGCTTCATTACAGGCTATATTCTGG    100
                     ..|.|..|||||.|..|||||.||.||.||.||.||.||.|.|||...||
RBAM_028720__     51 TCTCACAAACAGCCTCAGCGCGGCGGGTTTTATGACCGGATTTATCGCGG    100

BSNT_04656___    101 GAATGCTCTCTCTCTTTTTCTTCCGGCGCTTTTTCACTCGCCAGTTTTAT    150
                     |..||....|.||.|||||.|||||||||||.|||.|.||.|.||||||.
RBAM_028720__    101 GCTTGGCGGCGCTGTTTTTTTTCCGGCGCTTCTTCTCGCGGCCGTTTTAC    150

BSNT_04656___    151 CTATGGAAATTGAT-TTCTATCATCAA----GCTCTGTTTCATTTTTATA    195
                     .|.||||||.| || .||..|||||||    ||.|||    ||.||||||
RBAM_028720__    151 ATTTGGAAAAT-ATGGTCAGTCATCAAACTGGCGCTG----ATCTTTATA    195

BSNT_04656___    196 AAGGAACTGTACCTTGCCAATGTCAGTGTGATGAAATCAGTCTTATCTCC    245
                     ||||||.|.||..|.|||||||||||.|||.|||||.|.||..||||.||
RBAM_028720__    196 AAGGAATTATATTTGGCCAATGTCAGCGTGCTGAAAACCGTTATATCGCC    245

BSNT_04656___    246 AAAACTGAATATCAGACCGGGTATTTTTGCTTTTAAAACTGAACTGACGA    295
                     .||||||||.|||.|.|||||.|||||.||.|||||.||.|||.|||||.
RBAM_028720__    246 GAAACTGAACATCCGCCCGGGCATTTTCGCGTTTAAGACGGAATTGACGG    295

BSNT_04656___    296 AGGACTGGGAAATCACCCTGCTTTCTCTGCTCATTACATTAACGCCGGGA    345
                     ||||.|||||.|||||.|||||.||.|||.|.||.||.|||||.|||||.
RBAM_028720__    296 AGGATTGGGAGATCACGCTGCTCTCGCTGTTAATCACTTTAACACCGGGT    345

BSNT_04656___    346 ACCTTGGTGATGGATATTTCAGATGACAGAACAATACTTTATATTCATGC    395
                     ||..|.|||||||||||.||.||||||.|..|.||.||.|||||.||.||
RBAM_028720__    346 ACGCTCGTGATGGATATCTCCGATGACCGGTCGATTCTCTATATACACGC    395

BSNT_04656___    396 AATGGATATCGAGGATGCGGAAAAAGCGATTTTTGACATTCGGGAGTCAT    445
                     .|||||.||.||.||||||||.||||||||...||||||.||.|..||.|
RBAM_028720__    396 CATGGACATTGAAGATGCGGAGAAAGCGATCCATGACATCCGCGTCTCTT    445

BSNT_04656___    446 TTGAAAAAGCCATACAGGAGGTGAGCCGGTGA    477
                     ||||.||||||||.||||||||||||||.|||
RBAM_028720__    446 TTGAGAAAGCCATTCAGGAGGTGAGCCGCTGA    477


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