Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04652 and RBAM_028690

See DNA alignment / Visit BSNT_04652 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:07
# Commandline: needle
#    -asequence pep-align/BSNT_04652___mrpB.1.9828.seq
#    -bsequence pep-align/RBAM_028690___mrpB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04652___mrpB-RBAM_028690___mrpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04652___mrpB-RBAM_028690___mrpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04652___mrpB
# 2: RBAM_028690___mrpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:     124/143 (86.7%)
# Similarity:   137/143 (95.8%)
# Gaps:           0/143 ( 0.0%)
# Score: 645.0
# 
#
#=======================================

BSNT_04652___      1 MNEQKTNDLILQTATKLVSFIILLFSFYLFLSGHNAPGGGFVGGLITSSS     50
                     |.:|.|||:||||||||||||||||||||||||||||||||||||||||:
RBAM_028690__      1 MRQQNTNDIILQTATKLVSFIILLFSFYLFLSGHNAPGGGFVGGLITSSA     50

BSNT_04652___     51 IVLLLLAYDLKTVRSLLPVNFIYVAGAGLLLAVLTGVGSFVFGAPFLTHT    100
                     |||||||:|||||:|:||||||||||||||:|:.||.|||:|||||||||
RBAM_028690__     51 IVLLLLAFDLKTVKSILPVNFIYVAGAGLLIAIATGAGSFLFGAPFLTHT    100

BSNT_04652___    101 FGYFQLPILGKTELATATIFDLGVYLVVVGITMTIIQTIGEEE    143
                     ||:|.||:||.|||||||:|||||||||||:||||||||||||
RBAM_028690__    101 FGHFHLPVLGNTELATATLFDLGVYLVVVGVTMTIIQTIGEEE    143


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.