Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04652 and RBAM_028690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:07
# Commandline: needle
# -asequence dna-align/BSNT_04652___mrpB.1.9828.seq
# -bsequence dna-align/RBAM_028690___mrpB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04652___mrpB-RBAM_028690___mrpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04652___mrpB-RBAM_028690___mrpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04652___mrpB
# 2: RBAM_028690___mrpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 434
# Identity: 346/434 (79.7%)
# Similarity: 346/434 (79.7%)
# Gaps: 4/434 ( 0.9%)
# Score: 1373.0
#
#
#=======================================
BSNT_04652___ 1 GTGAATGAACAAAAAACAAATGACTTGATTCTTCAAACCGCGACAAAACT 50
.|||...|.|||||.|||||.|||.|.||.|||||.||.||.||.||.||
RBAM_028690__ 1 TTGAGACAGCAAAACACAAACGACATCATCCTTCAGACGGCAACGAAGCT 50
BSNT_04652___ 51 TGTATCCTTTATCATTTTGCTTTTCTCTTTCTATTTATTTTTATCAGGGC 100
||||||.|||||||||.||||||||||||||||||||||||||||.||||
RBAM_028690__ 51 TGTATCTTTTATCATTCTGCTTTTCTCTTTCTATTTATTTTTATCGGGGC 100
BSNT_04652___ 101 ATAACGCGCCCGGAGGAGGCTTTGTCGGCGGACTGATCACGTCCTCTTCC 150
|||||||.|||||.|||||.|||||||||||||||||.|||||.||..||
RBAM_028690__ 101 ATAACGCTCCCGGCGGAGGATTTGTCGGCGGACTGATTACGTCTTCGGCC 150
BSNT_04652___ 151 ATCGTTCTCTTGCTCTTGGCGTATGATTTAAAAACCGTGCGTTCCCTTTT 200
|||||.||.|||||.|||||.|.|||||||||||||||....||..||||
RBAM_028690__ 151 ATCGTGCTGTTGCTTTTGGCCTTTGATTTAAAAACCGTCAAATCGATTTT 200
BSNT_04652___ 201 GCCGGTCAATTTCATTTATGTCGCGGGAGCCGGCCTTCTGCTCGCTGTAT 250
|||.||||||||.||||||||.|||||.||.||.||.||..|||| .||
RBAM_028690__ 201 GCCCGTCAATTTTATTTATGTGGCGGGCGCGGGTCTGCTTATCGC--GAT 248
BSNT_04652___ 251 T--AACAGGCGTTGGCTCCTTTGTCTTCGGGGCTCCTTTTTTAACCCACA 298
| |||.||.|..||.||.||..|.|||||.||.||.|||.|.|||||.|
RBAM_028690__ 249 TGCAACGGGTGCAGGTTCGTTCTTATTCGGAGCACCCTTTCTCACCCATA 298
BSNT_04652___ 299 CATTCGGATACTTTCAGCTGCCGATCCTTGGGAAAACGGAGCTCGCCACA 348
|||||||..|.|||||.||.|||.|.||||||||.||||||||.||.||.
RBAM_028690__ 299 CATTCGGCCATTTTCATCTCCCGGTGCTTGGGAATACGGAGCTTGCGACG 348
BSNT_04652___ 349 GCGACGATATTTGATTTAGGCGTTTATCTTGTTGTCGTAGGCATAACGAT 398
||.||..|.|||||||||||.||.|||||.|||||.||.|||.|.|||||
RBAM_028690__ 349 GCCACTTTGTTTGATTTAGGTGTGTATCTCGTTGTTGTCGGCGTGACGAT 398
BSNT_04652___ 399 GACCATTATTCAAACGATTGGAGAGGAAGAATAA 432
|||||||||||||||||||||||||||||||||.
RBAM_028690__ 399 GACCATTATTCAAACGATTGGAGAGGAAGAATAG 432
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