Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04646 and RBAM_028650

See DNA alignment / Visit BSNT_04646 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:06
# Commandline: needle
#    -asequence pep-align/BSNT_04646___yufO.1.9828.seq
#    -bsequence pep-align/RBAM_028650___yufO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04646___yufO-RBAM_028650___yufO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04646___yufO-RBAM_028650___yufO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04646___yufO
# 2: RBAM_028650___yufO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 510
# Identity:     434/510 (85.1%)
# Similarity:   477/510 (93.5%)
# Gaps:           0/510 ( 0.0%)
# Score: 2240.0
# 
#
#=======================================

BSNT_04646___      1 MEYVIEMLNIRKAFPGIVANDNINLQVKKGEIHALLGENGAGKSTLMNVL     50
                     |:|:||||||||.||||||||::.||||||||||||||||||||||||||
RBAM_028650__      1 MDYIIEMLNIRKEFPGIVANDDVTLQVKKGEIHALLGENGAGKSTLMNVL     50

BSNT_04646___     51 FGLYQPERGEIRVRGEKVHINSPNKANDLGIGMVHQHFMLVDTFTVAENI    100
                     |||||||:||||||||:|||||||||||||||||||||||||||||:|||
RBAM_028650__     51 FGLYQPEKGEIRVRGERVHINSPNKANDLGIGMVHQHFMLVDTFTVSENI    100

BSNT_04646___    101 ILGKEPKKFGRIDRKRAGQEVQDISDRYGLQIHPEAKAADISVGMQQRAE    150
                     |||||||.||||||:||.::|:||||||||.|.||||.||||||||||||
RBAM_028650__    101 ILGKEPKTFGRIDRQRAARDVRDISDRYGLHIDPEAKVADISVGMQQRAE    150

BSNT_04646___    151 ILKTLYRGADILIFDEPTAVLTPHEIKELMQIMKNLVKEGKSIILITHKL    200
                     ||||||||||||||||||||||||||:||:|||||||.||||||||||||
RBAM_028650__    151 ILKTLYRGADILIFDEPTAVLTPHEIQELIQIMKNLVNEGKSIILITHKL    200

BSNT_04646___    201 KEIMEICDRVTVIRKGKGIKTLDVRDTNQDELASLMVGREVSFKTEKRAA    250
                     |||||:|||||:|||||||.||||..|:|||||||||||||||||:|:||
RBAM_028650__    201 KEIMEVCDRVTIIRKGKGITTLDVAHTDQDELASLMVGREVSFKTDKQAA    250

BSNT_04646___    251 QPGAEVLAIDGITVKDTRGIETVRDLSLSVKAGEIVGLAGVDGNGQSELI    300
                     .|..|||::..:||||.||:|.|:.|||||:||||||:||||||||||||
RBAM_028650__    251 DPKQEVLSLSDVTVKDARGVEAVKQLSLSVRAGEIVGIAGVDGNGQSELI    300

BSNT_04646___    301 EAVTGLRKTDSGTITLNGKQIQNLTPRKITESGIGHIPQDRHKHGLVLDF    350
                     ||:||||||::|||||||||:||:.|||:||:||||||||||||||||||
RBAM_028650__    301 EAITGLRKTNAGTITLNGKQLQNMPPRKVTEAGIGHIPQDRHKHGLVLDF    350

BSNT_04646___    351 PIGENILLQSYYKKPYSALGVLHKGEMYKKARSLISEYDVRTPDEYTHAR    400
                     ||||||:|||||:||||:.|:|:|..:|.|||:||.|||||||||||.||
RBAM_028650__    351 PIGENIVLQSYYQKPYSSFGILNKHTIYDKARNLIKEYDVRTPDEYTPAR    400

BSNT_04646___    401 ALSGGNQQKAIIGREIDRNPDLLIAAQPTRGLDVGAIEFVHKKLIEQRDA    450
                     |||||||||||||||:||||||||||||||||||||||||||||||||||
RBAM_028650__    401 ALSGGNQQKAIIGREVDRNPDLLIAAQPTRGLDVGAIEFVHKKLIEQRDA    450

BSNT_04646___    451 GKAVLLLSFELEEIMNLSDRIAVIFEGRIIASVNPQETTEQELGLLMAGS    500
                     |||||||||||:|||||||||||||||.|||:|||.||.|||||||||||
RBAM_028650__    451 GKAVLLLSFELDEIMNLSDRIAVIFEGSIIANVNPLETNEQELGLLMAGS    500

BSNT_04646___    501 TQKEAGKANG    510
                     .|.||||.:.
RBAM_028650__    501 KQMEAGKTHD    510


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