Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04643 and RBAM_028630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:06
# Commandline: needle
# -asequence pep-align/BSNT_04643___yufM.1.9828.seq
# -bsequence pep-align/RBAM_028630___yufM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04643___yufM-RBAM_028630___yufM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04643___yufM-RBAM_028630___yufM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04643___yufM
# 2: RBAM_028630___yufM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity: 197/235 (83.8%)
# Similarity: 213/235 (90.6%)
# Gaps: 11/235 ( 4.7%)
# Score: 1013.0
#
#
#=======================================
BSNT_04643___ 1 -----------MVGELNKRYLSQIDGFQLKGIASSFQSALHILGEHHIDL 39
|||||||||||||:||||||||||||||||:|.||||||
RBAM_028630__ 1 MINVLIVEDDPMVGELNKRYLSQIEGFQLKGIASSFQSALHVLSEHHIDL 50
BSNT_04643___ 40 ILLDIYMPGKNGLELLTELRAHNEAVDVIVISAASELDVIKKTLRYGAVD 89
||||||||||||||||||:|..||:|||||||||||||||||||||||||
RBAM_028630__ 51 ILLDIYMPGKNGLELLTEIRKQNESVDVIVISAASELDVIKKTLRYGAVD 100
BSNT_04643___ 90 YLIKPFEFERFQTALSDYRRKQKVYSTHRNMSQKELDAELFQKKEATEKV 139
||||||||:||||||||||||||||.:||:|:||||||||||||||.|||
RBAM_028630__ 101 YLIKPFEFDRFQTALSDYRRKQKVYQSHRSMTQKELDAELFQKKEAAEKV 150
BSNT_04643___ 140 QLPKGLTKSTLKLIWSSIQSFENESFTTEDLAKHTEISQVSIRKYLKFLE 189
.||||||||||||||:||:||.:.||||||||||||||||||||||||||
RBAM_028630__ 151 HLPKGLTKSTLKLIWASIESFGDGSFTTEDLAKHTEISQVSIRKYLKFLE 200
BSNT_04643___ 190 DVQVLNVEMAYGTIGRPVFQYNVNNSNLNGIKQYL 224
|:|||||||||||||||||||::|..|::.|||||
RBAM_028630__ 201 DIQVLNVEMAYGTIGRPVFQYHINTGNVSSIKQYL 235
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