Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04635 and RBAM_028560

See DNA alignment / Visit BSNT_04635 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:05
# Commandline: needle
#    -asequence pep-align/BSNT_04635___kapB.1.9828.seq
#    -bsequence pep-align/RBAM_028560___kapB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04635___kapB-RBAM_028560___kapB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04635___kapB-RBAM_028560___kapB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04635___kapB
# 2: RBAM_028560___kapB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:      94/128 (73.4%)
# Similarity:   110/128 (85.9%)
# Gaps:           0/128 ( 0.0%)
# Score: 515.0
# 
#
#=======================================

BSNT_04635___      1 MSTFETGSIVKGFYKTGVYIGEITACRLQHYLVKVKAVLTHPAQGDLHHP     50
                     |:|||.|:|||||||||.||||:|..|..|||||:|||||||||||||||
RBAM_028560__      1 MNTFEIGTIVKGFYKTGAYIGEVTDVRPNHYLVKIKAVLTHPAQGDLHHP     50

BSNT_04635___     51 KQADVPFFHERKALAYGEQTNIPHHMVKPYDGEVPDYTESLREATAQLRA    100
                     |||||||||||:|||:||||||||.||||:.|||||||.||:.|:|:|:.
RBAM_028560__     51 KQADVPFFHERRALAFGEQTNIPHQMVKPFGGEVPDYTASLQAASARLKD    100

BSNT_04635___    101 KLNEDGSEWAKRSLHNLDILEKEYFNQP    128
                     :|..||||||:|||.||..||::||.:.
RBAM_028560__    101 QLTADGSEWAERSLDNLAALERDYFKRT    128


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