Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04635 and RBAM_028560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:05
# Commandline: needle
# -asequence dna-align/BSNT_04635___kapB.1.9828.seq
# -bsequence dna-align/RBAM_028560___kapB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04635___kapB-RBAM_028560___kapB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04635___kapB-RBAM_028560___kapB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04635___kapB
# 2: RBAM_028560___kapB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 400
# Identity: 278/400 (69.5%)
# Similarity: 278/400 (69.5%)
# Gaps: 26/400 ( 6.5%)
# Score: 949.5
#
#
#=======================================
BSNT_04635___ 1 ATGAGCACGTTTGAGACAGGCTCTATCGTTAAAGGATTTTACAAAACAGG 50
||||..||||||||.|..|||.|.|||||.|||||.|||||.||||||||
RBAM_028560__ 1 ATGAATACGTTTGAAATCGGCACAATCGTAAAAGGGTTTTATAAAACAGG 50
BSNT_04635___ 51 TGTATACATAGGAGAAATCAC-GGCTTGCAGGCTGCAGCATTATTTAGTG 99
.|.|||||||||.|||.|.|| |.|.| |||||...|.||.|||||||||
RBAM_028560__ 51 AGCATACATAGGGGAAGTGACAGACGT-CAGGCCCAATCACTATTTAGTG 99
BSNT_04635___ 100 AAAGTGAAAGCGGTTCTTACCCATCCCGCTCAGGGAGACCTTCATCATCC 149
|||.|.|||||.|||||.||.|||||||||||.|||||.|||||||||||
RBAM_028560__ 100 AAAATTAAAGCCGTTCTGACGCATCCCGCTCAAGGAGATCTTCATCATCC 149
BSNT_04635___ 150 AAAACAGGCGGATGTGCCATTTTTCCATGAGAGAAAAGCGCTCGCATATG 199
.||.|||||||||||.||.|||||.|||||.||||.||||||.||||..|
RBAM_028560__ 150 GAAGCAGGCGGATGTTCCGTTTTTTCATGAAAGAAGAGCGCTTGCATTCG 199
BSNT_04635___ 200 GTGAACAGACCAATATCCCCCACCATATGGTGAAGCCTTATGACGGTGAA 249
|.||||||||.||.||.||.||.||.|||||.||.||.|.||..||.||.
RBAM_028560__ 200 GGGAACAGACAAACATACCGCATCAGATGGTCAAACCGTTTGGTGGCGAG 249
BSNT_04635___ 250 GTGCCGGATTATACCGAATCTCTGCGGGAGGCGACAGCACAGCTGAGAGC 299
|||||.||||||||.|..||..|.|..|.||||.|.||.|.|||||.||
RBAM_028560__ 250 GTGCCTGATTATACGGCTTCCTTACAAGCGGCGTCTGCCCGGCTGAAAG- 298
BSNT_04635___ 300 CAAAT----TGAATGAGGATGGTTCGGAGTGGGCAAAGCGCTCCCTTCAT 345
|| |.|..|.|||.||.||.||.|||||..|.||.||.||..|.
RBAM_028560__ 299 ---ATCAGCTTACAGCGGACGGCTCAGAATGGGCGGAACGTTCGCTCGAC 345
BSNT_04635___ 346 AATCTGGACATTTTAGAAAAAGAATATTTTAACCAGCCATAA-------- 387
||..|||.|...|||||....||.|||||||| ||
RBAM_028560__ 346 AACTTGGCCGCGTTAGAGCGTGACTATTTTAA--------AAGAACTTGA 387
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