Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04633 and RBAM_028540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:05
# Commandline: needle
# -asequence pep-align/BSNT_04633___patB.1.9828.seq
# -bsequence pep-align/RBAM_028540___patB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04633___patB-RBAM_028540___patB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04633___patB-RBAM_028540___patB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04633___patB
# 2: RBAM_028540___patB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 289/387 (74.7%)
# Similarity: 332/387 (85.8%)
# Gaps: 0/387 ( 0.0%)
# Score: 1578.0
#
#
#=======================================
BSNT_04633___ 1 MNFDKREERLGTQSVKWDKTGELFGVTDALPMWVADMDFRAPEAITEALK 50
||||.||.|||||||||||...||||:|||||||||||||||||:|:|||
RBAM_028540__ 1 MNFDLRENRLGTQSVKWDKAEALFGVSDALPMWVADMDFRAPEAVTDALK 50
BSNT_04633___ 51 ERLDHGIFGYTTPDQKTRDAVCGWMQNRHGWKVNPESITFSPGVVTALSM 100
.||||||||||:||:.||:||..|::.|||::.:|.||.||||||||:||
RBAM_028540__ 51 ARLDHGIFGYTSPDENTREAVASWLETRHGYRPDPASIAFSPGVVTAISM 100
BSNT_04633___ 101 AVQAFTEPGDQVVVQPPVYTPFYHMVEKNGRHILHNPLLEEDGAYAMDFE 150
||||||||||.|::|.|||||||.|:::|.|.:|||||.||:|.|.||||
RBAM_028540__ 101 AVQAFTEPGDPVLIQSPVYTPFYQMIKENKRQVLHNPLREENGVYCMDFE 150
BSNT_04633___ 151 DLETKLSDPSVTLFILCNPHNPSGRSWGREDLLKLGELCLEHGVTVVSDE 200
|||.||:|..|.|.|||||||||||:|.|::|:|||.||..|.|||||||
RBAM_028540__ 151 DLEKKLNDSEVKLMILCNPHNPSGRAWSRDELMKLGSLCAAHNVTVVSDE 200
BSNT_04633___ 201 IHSDLMLYGHKHTPFASLSDDFADISVTCAAPSKTFNIAGLQASAIIIPD 250
|||||||||..||||||||::||.|||||.||||||||||:|||||||||
RBAM_028540__ 201 IHSDLMLYGKPHTPFASLSEEFARISVTCVAPSKTFNIAGIQASAIIIPD 250
BSNT_04633___ 251 RLKRAKFSASLQRNGLGGMNAFAVTAIEAAYSKGGPWLDELITYIEKNMN 300
|.|||||||:|.:||:..:|.|||.||||||:|||||||.||.|||.||.
RBAM_028540__ 251 RYKRAKFSAALHQNGISSLNTFAVAAIEAAYTKGGPWLDALIPYIEGNMK 300
BSNT_04633___ 301 EAEAFLSTELPKVKMMKPDASYLIWLDFSAYGLSDTELQQRMLKKGKVIL 350
.||.||..|||||:|||||||||||:|||.||.||.||::|||||||:||
RBAM_028540__ 301 LAEDFLRKELPKVRMMKPDASYLIWMDFSEYGFSDAELKERMLKKGKIIL 350
BSNT_04633___ 351 EPGTKYGPGGEGFMRLNAGCSLATLQDGLRRIKAALS 387
|||||||||||||||||.|||.|.:::||:|:||||:
RBAM_028540__ 351 EPGTKYGPGGEGFMRLNVGCSAAAVKEGLKRMKAALA 387
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