Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04631 and RBAM_028530

See DNA alignment / Visit BSNT_04631 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:05
# Commandline: needle
#    -asequence pep-align/BSNT_04631___yugE.1.9828.seq
#    -bsequence pep-align/RBAM_028530___yugE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04631___yugE-RBAM_028530___yugE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04631___yugE-RBAM_028530___yugE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04631___yugE
# 2: RBAM_028530___yugE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      66/89 (74.2%)
# Similarity:    73/89 (82.0%)
# Gaps:           3/89 ( 3.4%)
# Score: 342.0
# 
#
#=======================================

BSNT_04631___      1 ---MEESQAVREMIKIIAKWDPFKYGEEFYETEAVDVVQAVYDEDDPDVL     47
                        |||||||.||:|||||||||||||:||||||||:|||||.||..|.|
RBAM_028530__      1 MMKMEESQAVMEMMKIIAKWDPFKYGEDFYETEAVDIVQAVYSEDRADKL     50

BSNT_04631___     48 AKSIQQIFETSFEQTLPIDSCREVAGQLLFIKNSSSCTP     86
                     |.:||.|||.||||.|||:.|::.|.||||||.||||||
RBAM_028530__     51 AAAIQDIFEASFEQKLPIEGCQKAAEQLLFIKESSSCTP     89


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