Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04628 and RBAM_028520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:05
# Commandline: needle
# -asequence pep-align/BSNT_04628___yugF.1.9828.seq
# -bsequence pep-align/RBAM_028520___yugF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04628___yugF-RBAM_028520___yugF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04628___yugF-RBAM_028520___yugF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04628___yugF
# 2: RBAM_028520___yugF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity: 212/273 (77.7%)
# Similarity: 245/273 (89.7%)
# Gaps: 0/273 ( 0.0%)
# Score: 1156.0
#
#
#=======================================
BSNT_04628___ 1 MEAVSPIRRFTVDGVNVYYEHYQNPGRQTLVCVHGFLSSAFSFRKVIPLL 50
|||||||:|..:|||.:|||||:||||||||||||||||||||||:||||
RBAM_028520__ 1 MEAVSPIKRAAIDGVELYYEHYENPGRQTLVCVHGFLSSAFSFRKLIPLL 50
BSNT_04628___ 51 RDKYDIIALDLPPFGQSEKSRTFIYTYQNLAKLVIGILEHLQVKQAVLVG 100
|:.|||||:||||||||||||||:|||.|||||:||:||.|.:.:|.|:|
RBAM_028520__ 51 RNHYDIIAVDLPPFGQSEKSRTFVYTYANLAKLLIGLLEKLGISRAALIG 100
BSNT_04628___ 101 HSMGGQISLSAALQKPELFSKVVLLCSSGYLKRSHPTIIFGTHIPYFHLY 150
|||||||||||:|.:||||||:||||||||||||||:||||||:|.|.||
RBAM_028520__ 101 HSMGGQISLSASLLRPELFSKIVLLCSSGYLKRSHPSIIFGTHLPCFDLY 150
BSNT_04628___ 151 IKRWLSKEGVMKNLLNVVHDKSLIDEEMIDGYGRPFQDEQIFKAMTRFIR 200
:|.||||:||:.||||||||::|||:||||||.:||.|.:||||||||||
RBAM_028520__ 151 LKYWLSKDGVLNNLLNVVHDRTLIDQEMIDGYEKPFTDRRIFKAMTRFIR 200
BSNT_04628___ 201 HREGDLEPEQLKKMNKPALLIWGEEDRIVPMEIGKRLHADLPNSVLYSLG 250
|||||||||.|||:..|||||||||||:||:.:|||||.|||:|:||||.
RBAM_028520__ 201 HREGDLEPEDLKKVQNPALLIWGEEDRVVPVSVGKRLHDDLPDSILYSLK 250
BSNT_04628___ 251 QTGHLVPEERPELVSEHIADFIN 273
.|||||||||||.|||.|.:||.
RBAM_028520__ 251 DTGHLVPEERPEFVSERIFEFIQ 273
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