Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04618 and RBAM_028420

See DNA alignment / Visit BSNT_04618 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence pep-align/BSNT_04618.1.9828.seq
#    -bsequence pep-align/RBAM_028420___yugM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04618-RBAM_028420___yugM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04618-RBAM_028420___yugM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04618
# 2: RBAM_028420___yugM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:      43/167 (25.7%)
# Similarity:    56/167 (33.5%)
# Gaps:          60/167 (35.9%)
# Score: 125.0
# 
#
#=======================================

BSNT_04618         1 MRKLTGICRSAFYKIRKVLM-------------FMKQLVKHLIIAGFSAA     37
                                       :|             .|:.|.||.:|:..|||
RBAM_028420__      1 ------------------MMGQPFLNRERCDDELMRLLCKHAVISVCSAA     32

BSNT_04618        38 ILSFLISFDAVYTEFSSSFGGTLSHFFIHAFLLIGLPLALFTDAVHRILH     87
                     |         ||:....|....|......||     ||.||||.|...|.
RBAM_028420__     33 I---------VYSALKLSPESLLQTILFFAF-----PLGLFTDMVRLKLK     68

BSNT_04618        88 LKRTHTLFTKLGLYATVVYVSWDSAVWLAAAMAVYFLIECAFFPVGRAKE    137
                     :.|..:|.||..|||.|.|:|.::.:   :|:..|.|||||.....|...
RBAM_028420__     69 IGRMQSLITKCCLYAAVFYISTEAVL---SAIVTYVLIECAVTSFQRLSA    115

BSNT_04618       138 TTISM------------    142
                     ...|.            
RBAM_028420__    116 APDSSRAPYEDAAERGR    132


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