Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04616 and RBAM_028410

See DNA alignment / Visit BSNT_04616 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence pep-align/BSNT_04616___yugN.1.9828.seq
#    -bsequence pep-align/RBAM_028410___yugN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04616___yugN-RBAM_028410___yugN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04616___yugN-RBAM_028410___yugN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04616___yugN
# 2: RBAM_028410___yugN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:     100/134 (74.6%)
# Similarity:   116/134 (86.6%)
# Gaps:           0/134 ( 0.0%)
# Score: 538.0
# 
#
#=======================================

BSNT_04616___      1 MIPIPSAIDGQSFLLQELEQVMKPLGYVINGGWEYDHGYFDYKIDDRDGY     50
                     ||.|||:::||||||:|||||:||:||.|.||||||.|:|||||.|:|||
RBAM_028410__      1 MISIPSSLEGQSFLLRELEQVLKPIGYTIGGGWEYDRGFFDYKISDQDGY     50

BSNT_04616___     51 LFLRIPVNAVQGSLDERGAAVRIGTPFMLRQVFQADVDDHAEGGPFQSLF    100
                     |||||||.|.:|.||||||||.|||||:||.|:|.:.||||.||.|:|||
RBAM_028410__     51 LFLRIPVEANKGHLDERGAAVTIGTPFLLRHVYQEETDDHAGGGVFESLF    100

BSNT_04616___    101 NQFSEPERRDAEIDPAFLDIGASLVKELEDVLLH    134
                     ||||||:||||.||.::.|||.||||||||||||
RBAM_028410__    101 NQFSEPKRRDAAIDRSYTDIGISLVKELEDVLLH    134


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