Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04604 and RBAM_028360

See DNA alignment / Visit BSNT_04604 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence pep-align/BSNT_04604___yugU.1.9828.seq
#    -bsequence pep-align/RBAM_028360___yugU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04604___yugU-RBAM_028360___yugU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04604___yugU-RBAM_028360___yugU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04604___yugU
# 2: RBAM_028360___yugU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 140
# Identity:     109/140 (77.9%)
# Similarity:   122/140 (87.1%)
# Gaps:           8/140 ( 5.7%)
# Score: 614.0
# 
#
#=======================================

BSNT_04604___      1 MLKTLQIKTTKRDEMIDITREVEAFLQETGITSGAALIYCPHTTAGITIN     50
                     |||.|||:|.:||||||||.|.||||::||:.:|.|||||||||||||||
RBAM_028360__      1 MLKKLQIQTNRRDEMIDITHEAEAFLRKTGVKNGLALIYCPHTTAGITIN     50

BSNT_04604___     51 ENADPDVKKDMLRRFDEVYPWEHELDRHMEGNTAAHMKSSTVGASQHVIV    100
                     ||||||||:||||||||:||||||||||||||||||||:||.|||||||:
RBAM_028360__     51 ENADPDVKRDMLRRFDEMYPWEHELDRHMEGNTAAHMKASTTGASQHVII    100

BSNT_04604___    101 ENGRLILGTWQGIYFCEFDGPRTRTCYIKMMG--------    132
                     |:||||||||||:|||||||||.||||||:..        
RBAM_028360__    101 EDGRLILGTWQGVYFCEFDGPRNRTCYIKIQAEPEENTNE    140


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