Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04600 and RBAM_028330

See DNA alignment / Visit BSNT_04600 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence pep-align/BSNT_04600___tgl.1.9828.seq
#    -bsequence pep-align/RBAM_028330___tgl.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04600___tgl-RBAM_028330___tgl.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04600___tgl-RBAM_028330___tgl.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04600___tgl
# 2: RBAM_028330___tgl
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     175/247 (70.9%)
# Similarity:   208/247 (84.2%)
# Gaps:           2/247 ( 0.8%)
# Score: 964.0
# 
#
#=======================================

BSNT_04600___      1 --MIIVSGQLLRPQDIENWQIDQNLNPLLKEMIETPVQFDYHSIAELMFE     48
                       |||:|||:||||||.|||.:::|.|.:.|::.:||||||.||||||||
RBAM_028330__      1 MKMIIISGQVLRPQDIANWQTEESLVPYINELLNSPVQFDYGSIAELMFE     50

BSNT_04600___     49 LKLRMNIVAAAKTLHKSGAKFATFLKTYGNTTYWRVSPEGALELKYRMPP     98
                     ::||.:||.||:.||.||.|||||.||||||.||||:||||||||||:|.
RBAM_028330__     51 VRLRRHIVEAARELHGSGVKFATFAKTYGNTAYWRVTPEGALELKYRIPA    100

BSNT_04600___     99 SKAIRDIAENGPFYAFECATAIVIIYYLALIDTIGEDKFNASFDRIILYD    148
                     |||||||.|||.|||||||||||:|||||::.||||::||..|..|.|||
RBAM_028330__    101 SKAIRDIIENGAFYAFECATAIVVIYYLAVLKTIGEERFNRRFRDITLYD    150

BSNT_04600___    149 WHYEKLPIYTETGHHFFLGDCLYFKNPEFDPQKAQWRGENVILLGEDKYF    198
                     ||||.||||||||.||..|||||||||:|:|.||||||||||::|.|:||
RBAM_028330__    151 WHYEHLPIYTETGRHFLRGDCLYFKNPDFNPAKAQWRGENVIVMGNDQYF    200

BSNT_04600___    199 AHGLGILNGKQIIDKLNSFRKKGALQSAYLLSQATRLDVPSLFRIVR    245
                     |||||||..:|||.:|||.|||.|:|.||||:||||||.|:|::|:.
RBAM_028330__    201 AHGLGILTAEQIIQRLNSLRKKNAMQPAYLLNQATRLDAPALYQIMH    247


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