Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04597 and RBAM_028310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence pep-align/BSNT_04597.1.9828.seq
# -bsequence pep-align/RBAM_028310___tlpA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04597-RBAM_028310___tlpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04597-RBAM_028310___tlpA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04597
# 2: RBAM_028310___tlpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 663
# Identity: 380/663 (57.3%)
# Similarity: 442/663 (66.7%)
# Gaps: 156/663 (23.5%)
# Score: 1875.5
#
#
#=======================================
BSNT_04597 0 -------------------------------------------------- 0
RBAM_028310__ 1 MKKTAKKIARKSIAKKLIISFLLILLIPVAVLAAGAYRSAASSVEKQMME 50
BSNT_04597 0 -------------------------------------------------- 0
RBAM_028310__ 51 SAEGNVQILNNMIDDRIGMFTKSSAYFSEWATSAKFKEKNQTEMQERFKQ 100
BSNT_04597 1 ---------------------------MPSDFNALERDWYKEAMANKGKT 23
||:|||.|||.||:|||.|||:|
RBAM_028310__ 101 FIESNDKASAVFSSSKEGTFTRYPHADMPADFNPLERSWYQEAMENKGQT 150
BSNT_04597 24 IVTEPYESISSGKMVVTIARQTVDGSGVVAIDMKIDDLVTTAKGINIGKE 73
|:|:||||||:.|||||:||...|||||||||:|||||:|..|.:|||||
RBAM_028310__ 151 IITDPYESISNKKMVVTMARAAQDGSGVVAIDIKIDDLITMTKEVNIGKE 200
BSNT_04597 74 GYAFILSQNKKVIAYSGEKAGTELKGDWVDKLYKDKSGDFEYTYKGKKKK 123
|||||||:|||.:|||.||||..:.|.|||.|:..:.|:||||..||.||
RBAM_028310__ 201 GYAFILSKNKKAVAYSDEKAGAAVSGKWVDTLFSGQKGNFEYTLNGKAKK 250
BSNT_04597 124 MAFATSETTGWKISGTMYANEIHDAASRVLIMASIVLAIAIAAGMTAIYF 173
||:.|:|.|||||||||...||.|||..||.:|.|:|||||||||..|||
RBAM_028310__ 251 MAYVTNEATGWKISGTMSVEEIKDAARPVLTLAVIILAIAIAAGMIFIYF 300
BSNT_04597 174 VIRSITKPLRRIVASAEKISEGDLTETIEINSKDELGVLSESFNHMAHSL 223
|||||||||:|:||||||||.|||||||:::|:||||||.:|||||..||
RBAM_028310__ 301 VIRSITKPLKRLVASAEKISSGDLTETIDVSSQDELGVLGKSFNHMTDSL 350
BSNT_04597 224 RSLIHGIKDSVEHVASSSEELTASADQTSRATEHITMAIEQFSNGSESQS 273
||||.||:|||||||||||||||||:|||:||||||:||||||||:|.||
RBAM_028310__ 351 RSLIQGIQDSVEHVASSSEELTASAEQTSKATEHITLAIEQFSNGTEDQS 400
BSNT_04597 274 EKIETTTEQINEMNDGLAELAR---------------------------- 295
|.|:..|.|:|||.|||::||.
RBAM_028310__ 401 ESIDKATAQVNEMKDGLSDLAEAAAVVTETSIESAEISGAGERLVKKTAG 450
BSNT_04597 296 QMNTIDHSVKAAEQVVKGLEIKSKDITNILRVINGIADQTNLLALNAAIE 345
||..||.||..|||||:|||:||:|||:||||||||||||||||||||||
RBAM_028310__ 451 QMGAIDQSVSKAEQVVQGLELKSQDITSILRVINGIADQTNLLALNAAIE 500
BSNT_04597 346 AARAGEYGRGFSVVAEEVRKLAVQSADSAKEIESLISEIVKEIHTSLNVL 395
||||||||||||||||||||||||||||||||||||.||||||||||.:|
RBAM_028310__ 501 AARAGEYGRGFSVVAEEVRKLAVQSADSAKEIESLIHEIVKEIHTSLGML 550
BSNT_04597 396 QSVNKEVETGLVMTDETKQSFKHISQMTNQIASELQNMNATVEELSAGAQ 445
:|||.||::||.:||||::||:.||..|||||.||||||||||:||||:|
RBAM_028310__ 551 ESVNHEVKSGLQLTDETEKSFRDISVKTNQIAGELQNMNATVEQLSAGSQ 600
BSNT_04597 446 EISAASNDITAISKESSDGIQDIAASAEEQLASMEEISSSALTLERMSEE 495
|:|.||.||.|:|::|:.|||||||||||||||||||||||:|||:|:||
RBAM_028310__ 601 EVSNASEDIAAVSRQSAAGIQDIAASAEEQLASMEEISSSAVTLEKMAEE 650
BSNT_04597 496 LRDLTKQFKVDRQ 508
||:|||:||::.
RBAM_028310__ 651 LRELTKRFKINS- 662
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