Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04596 and RBAM_028300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence pep-align/BSNT_04596___mcpA.1.9828.seq
# -bsequence pep-align/RBAM_028300___mcpA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04596___mcpA-RBAM_028300___mcpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04596___mcpA-RBAM_028300___mcpA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04596___mcpA
# 2: RBAM_028300___mcpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 662
# Identity: 531/662 (80.2%)
# Similarity: 603/662 (91.1%)
# Gaps: 1/662 ( 0.2%)
# Score: 2703.0
#
#
#=======================================
BSNT_04596___ 1 MMKKILQLIKQRSITRKLLVSFLSILIIPVVILAIFAYQSASSSLDRQMM 50
||||:|:|||||:|||||:|||:|||:|:..||..|||||.|:||||||
RBAM_028300__ 1 -MKKIVQIIKQRSLTRKLLISFLAILILPISTLAFIAYQSAVSTLDRQMM 49
BSNT_04596___ 51 GSALENVQQLNEIINTSIGEKENSADYFSEWLTKEKYNAKSNASIAEKFS 100
||||:||||:|::|||||.:||:...|||:||||::|..|:.:.|.:||:
RBAM_028300__ 50 GSALDNVQQINDMINTSISQKEDGTAYFSDWLTKDRYKPKNQSQITDKFT 99
BSNT_04596___ 101 QYISINKDVESIYTSDTKGHFTRYPDLPMPSGYNPVERDWYKKAVANKGK 150
:|:.|||||||||||||:|||||||||.||.||||:|||||||||.||||
RBAM_028300__ 100 EYMKINKDVESIYTSDTEGHFTRYPDLQMPKGYNPIERDWYKKAVENKGK 149
BSNT_04596___ 151 VVITDPYKTASTNTMVVTIAQQTKDGSGVIAINMTIENLLKTTKKVNIGT 200
||:||||:||||||||||:.|||||||||:||||.|:.|||||||||||.
RBAM_028300__ 150 VVVTDPYRTASTNTMVVTVVQQTKDGSGVVAINMKIDELLKTTKKVNIGK 199
BSNT_04596___ 201 QGYAFIMTKDKKVVAHPNEKSGTELKGDWLDKMLSADKGDFQYTMDGDKK 250
.|||||:|||||||||||..|||.|.|:|.:::.|:.||||||..||.:|
RBAM_028300__ 200 SGYAFILTKDKKVVAHPNRTSGTVLNGEWAEQLFSSKKGDFQYKYDGQEK 249
BSNT_04596___ 251 KMAFDTNKLTGWKIGGTMYLDEIHEAAQPVLHLALIVLAAAIIIGIIVMT 300
|||:|||.||||||.||||||||||||.|:|||:|:||..||:||.|||.
RBAM_028300__ 250 KMAYDTNGLTGWKITGTMYLDEIHEAALPILHLSLLVLVLAIVIGTIVMV 299
BSNT_04596___ 301 LIIRSITTPLKQLVGSSKRISEGDLTETIDIRSKDELGELGKSFNNMASS 350
|||||||.||||||.|||:||||||||||:|:||||||||||||||||:|
RBAM_028300__ 300 LIIRSITKPLKQLVTSSKQISEGDLTETIEIQSKDELGELGKSFNNMAAS 349
BSNT_04596___ 351 LRSLIHAIQDSVDNVAASSEELTASAAQTSKATEHITLAIEQFSNGNEKQ 400
||||||||||||:|||:|||||||||.|||||||||||||||||||||.|
RBAM_028300__ 350 LRSLIHAIQDSVNNVASSSEELTASAEQTSKATEHITLAIEQFSNGNESQ 399
BSNT_04596___ 401 NENIETAAEHIYQMNDGLTNMAQASEVITDSSVQSTEIASEGGKLVHQTI 450
:||||:|||||||||.||.:||:||.|||:||..|.|:|:.||||||||:
RBAM_028300__ 400 SENIESAAEHIYQMNSGLKDMAKASAVITESSATSAEVANSGGKLVHQTV 449
BSNT_04596___ 451 GQMNVIDKSVKEAEQVVRGLETKSKDITNILRVINGIADQTNLLALNAAI 500
|||||||:||||||||||||||||||||||||||||||||||||||||||
RBAM_028300__ 450 GQMNVIDRSVKEAEQVVRGLETKSKDITNILRVINGIADQTNLLALNAAI 499
BSNT_04596___ 501 EAARAGEYGRGFSVVAEEVRKLAVQSADSAKEIEGLIIEIVKEINTSLGM 550
||||||||||||||||||||||||||||||||||.||||||.||||||||
RBAM_028300__ 500 EAARAGEYGRGFSVVAEEVRKLAVQSADSAKEIESLIIEIVNEINTSLGM 549
BSNT_04596___ 551 FQSVNQEVQTGLDITDKTEMSFKRISEMTNQIAGELQNMSATVQQLSASS 600
|||||:||::|||||::||.|||||||||||||||:|||:|||:||:|.|
RBAM_028300__ 550 FQSVNKEVESGLDITNQTETSFKRISEMTNQIAGEIQNMNATVEQLTAGS 599
BSNT_04596___ 601 EEVSGASEHIASISKESSAHIQDIAASAEEQLASMEEISSSAETLSSMAE 650
:::|||||.||||:|||||.|||||||||||||||||||||:||||.|||
RBAM_028300__ 600 QQISGASEQIASIAKESSASIQDIAASAEEQLASMEEISSSSETLSQMAE 649
BSNT_04596___ 651 ELRDMTKRFKIE 662
|||||||||||:
RBAM_028300__ 650 ELRDMTKRFKID 661
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