Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04582 and RBAM_028260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence pep-align/BSNT_04582___yubA.1.9828.seq
# -bsequence pep-align/RBAM_028260___yubA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04582___yubA-RBAM_028260___yubA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04582___yubA-RBAM_028260___yubA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04582___yubA
# 2: RBAM_028260___yubA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity: 342/388 (88.1%)
# Similarity: 372/388 (95.9%)
# Gaps: 2/388 ( 0.5%)
# Score: 1751.5
#
#
#=======================================
BSNT_04582___ 1 METLQTWSGRFKRFFLDNKFVLFLLVLLLIGLNILVFTKTSFIFTPIIVL 50
|||||||.||||:||||||||||||||||||||||||.||||||||||||
RBAM_028260__ 1 METLQTWGGRFKQFFLDNKFVLFLLVLLLIGLNILVFMKTSFIFTPIIVL 50
BSNT_04582___ 51 LKTISLPIILTGIVFYLLNPVVDFLERRRIRRIYSILLLYLLVIGLITIT 100
||||:||:||||||:|||||:||.||:.|::|:||||||||::|||||||
RBAM_028260__ 51 LKTIALPVILTGIVYYLLNPIVDILEKIRVKRVYSILLLYLIIIGLITIT 100
BSNT_04582___ 101 IVSIIPFLKEQIMSLIDNIPRYVDIVENQTKQLIGSNFVNQAQQTTNINI 150
:|||||||||||||||||:|:||||||:|||.||||:||||||:|.||||
RBAM_028260__ 101 VVSIIPFLKEQIMSLIDNLPKYVDIVEDQTKSLIGSDFVNQAQKTMNINI 150
BSNT_04582___ 151 SDLATKVSDQAATIVNSTFTGVGNFIGALTEIIISIVTVPFILFYLLKDG 200
||||.|||.|||||.||||||||||||||||:||||||||||||||||||
RBAM_028260__ 151 SDLANKVSAQAATIANSTFTGVGNFIGALTEVIISIVTVPFILFYLLKDG 200
BSNT_04582___ 201 KKLPVYILKFVPTQLKEQTYTVLSEMNHRLSSYIRGQIIVSFCIGFLLFI 250
||||:||||||||:|||||||:|||||||||||||||:||||||||||||
RBAM_028260__ 201 KKLPIYILKFVPTRLKEQTYTMLSEMNHRLSSYIRGQVIVSFCIGFLLFI 250
BSNT_04582___ 251 GYLIIGLDYASLLAVIAACTSIVPYLGPTIAITPAIIIAIVTSPLMLLKL 300
|||||||||||||||||||||:|||||||||||||||||:||||||||||
RBAM_028260__ 251 GYLIIGLDYASLLAVIAACTSVVPYLGPTIAITPAIIIALVTSPLMLLKL 300
BSNT_04582___ 301 VIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFLLLTAGKLFGVVGIILA 350
.||||:|||:|||||||||||||||||||||||:||||||||||||||||
RBAM_028260__ 301 AIVWTVVQLVEGKLISPQIMGKNLHIHPITIIFVLLTAGKLFGVVGIILA 350
BSNT_04582___ 351 IPGYAVAKVITTHLFDWFKMRSHLYDEEKNENTPGHKV 388
||||||.||:|||||||||||||||:||||: .|.|.
RBAM_028260__ 351 IPGYAVIKVVTTHLFDWFKMRSHLYEEEKND--AGSKS 386
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